Pan-target SELEX aptamer atlas
PanApta re-processes raw SELEX reads into round-level count, frequency and enrichment tables across diverse protein, DNA and RNA targets — and overlays curated affinity records and structural features in one queryable resource.
Targets (data)
3,057
with ingested round-counts
Targets (cat.)
890
manifest-only entries
BioProjects
26
public SELEX provenance
Sequences
30,439,227
aptamers (top by enrichment)
Round counts
44,036,789
long-format observations
Affinity rows
2,681
curated Kd / Ki / IC50
Targets in this release
View all →| Target | UniProt | Source | Rounds | Sequences |
|---|---|---|---|---|
| AC008770 2 libraries | ENSG00000267179 (Ensembl) ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 4 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 2 | 10,000 |
| AC092835 2 libraries | Q96K75 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 2 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 3 | 10,000 |
| ADNP 2 libraries | Q9H2P0 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 1 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 3 | 10,000 |
| ADNP2 2 libraries | Q6IQ32 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 2 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 3 | 10,000 |
| AEBP1 2 libraries | Q8IUX7 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 4 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 1 | 10,000 |
| AHCTF1 2 libraries | Q8WYP5 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 4 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 3 | 10,000 |
| AHDC1 2 libraries | Q5TGY3 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 1 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 2 | 10,000 |
| AKAP8 2 libraries | O43823 ↗ | Synthetic Library + Genomic Library | — | 20,000 |
| ↳ Synthetic Library | ↑ | PRJEB61115 ↗ | 3 | 10,000 |
| ↳ Genomic Library | ↑ | PRJEB76622 ↗ | 3 | 10,000 |
What sets PanApta apart
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Round-level enrichment trajectories. Every sequence carries its full per-round count + frequency vector — not just a final-round abundance.
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Re-processed from raw reads. Unified bioinformatics pipeline applied across 3947 targets and 21+ public BioProjects.
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Curated affinity overlay. 2,681 Kd/Ki/IC50 records merged from UTexas, AptamerBase, Ribocentre and PDB.
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ML-ready protein context. ESM-2 embeddings and Boltz-2 surface descriptors linked per target.