CAS9
registry:0001
Experimental material and evidence scope
- Experimental material
- CAS9
- Material type
- Reference identity only
- Material identity
- Exact experimental material unresolved
- Source support
- Supported or qualified
- Relationship to the registered name
- Source-named target
- Research purpose
- Unresolved
Separate Cas9-labelled libraries from Cas12a and retain assay/control roles; registry species and accession remain unspecified.
Query and download access
PRJNA547810 Linked; not live-checked
Source context
Counts and their scope
| Measure | Count | Scope or reason unavailable |
|---|---|---|
| Independent molecular targets | Undetermined | this registration Experimental identity unresolved |
| Processed source sequence rows | Undetermined | historical processed source labels; not public unique sequences Not yet verified |
| Retained candidate records | Undetermined | sum of distinct linked source-target groups; not globally unique sequences Not yet connected |
| Round records | Undetermined | sum of distinct linked source-target groups; not globally unique sequences Not yet connected |
| Sequence–round observations | Undetermined | sum of distinct linked source-target groups; not globally unique sequences Not yet connected |
| Target-specific read records | Undetermined | experiment material matched to this registration No target-specific count established |
Sources and supporting relationships
Source-named target · crispr_cas_affinity_prjna547810 · PRJNA547810
Systematic profiling of in vitro binding affinity and endonuclease activity of CRISPR enzymes
Separate Cas9-labelled libraries from Cas12a and retain assay/control roles; registry species and accession remain unspecified.
Samples, libraries and source files (19)
Sample and library labels are preserved from the source. Unresolved labels are not automatically converted into selection rounds.
| Run and sample | Library label | Source file |
|---|---|---|
| SRR9219777 SAMN11976894 | Cas9-7 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq VEGFA uncut fraction | SRR9219777.fastq.gz |
| SRR9219778 SAMN11976895 | Cas9-8 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq VEGFA input | SRR9219778.fastq.gz |
| SRR9219779 SAMN11976892 | Cas9-5 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq NANOG input, repeat 1 | SRR9219779.fastq.gz |
| SRR9219780 SAMN11976893 | Cas9-6 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq NANOG input, repeat 2 | SRR9219780.fastq.gz |
| SRR9219781 SAMN11976898 | Cas9-11 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq NANOG bound fraction, repeat 1 | SRR9219781.fastq.gz |
| SRR9219782 SAMN11976899 | Cas9-12 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq NANOG bound fraction, repeat 2 | SRR9219782.fastq.gz |
| SRR9219783 SAMN11976896 | Cas9-9 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq FANCF bound fraction | SRR9219783.fastq.gz |
| SRR9219784 SAMN11976897 | Cas9-10 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq FANCF free fraction | SRR9219784.fastq.gz |
| SRR9219785 SAMN11976900 | Cas9-13 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq NANOG free fraction, repeat 1 | SRR9219785.fastq.gz |
| SRR9219786 SAMN11976901 | Cas9-14 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq NANOG free fraction, repeat 2 | SRR9219786.fastq.gz |
| SRR9219787 SAMN11976903 | Cas9-16 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq VEGFA free fraction | SRR9219787.fastq.gz |
| SRR9219788 SAMN11976902 | Cas9-15 Illumina HiSeq 4000 sequencing: Cas9 Spec-seq VEGFA bound fraction | SRR9219788.fastq.gz |
| SRR9219789 SAMN11976891 | Cas9-4 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq NANOG uncut fraction, repeat 2 | SRR9219789.fastq.gz |
| SRR9219790 SAMN11976890 | Cas9-3 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq NANOG uncut fraction, repeat 1 | SRR9219790.fastq.gz |
| SRR9219791 SAMN11976906 | sCas9-3 Illumina HiSeq 4000 sequencing: Cas9 SELEX-seq NANOG Round 4 library | SRR9219791.fastq.gz |
| SRR9219796 SAMN11976889 | Cas9-2 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq FANCF input, repeat 1 forward read | SRR9219796.fastq.gz |
| SRR9219797 SAMN11976888 | Cas9-1 Illumina HiSeq 4000 sequencing: Cas9 SEAM-seq FANCF uncut fraction | SRR9219797.fastq.gz |
| SRR9219800 SAMN11976905 | sCas9-2 Illumina HiSeq 4000 sequencing: Cas9 SELEX-seq NANOG Round 5 library | SRR9219800.fastq.gz |
| SRR9219801 SAMN11976904 | sCas9-1 Illumina HiSeq 4000 sequencing: Cas9 SELEX-seq NANOG input library | SRR9219801.fastq.gz |
Remaining evidence gaps
- Reference identity does not establish exact experimental construct, preparation or material.
- No explicit public retained-candidate target mapping is established in this matrix.