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GRSF1

registry:0289 · Q12849

Experimental material and evidence scope

Experimental material
GRSF1
Material type
Reference identity only
Material identity
Exact experimental material unresolved
Source support
Supported or qualified
Relationship to the registered name
Source-named target
Research purpose
Unresolved

Human endogenous, overexpressed and fragment libraries are distinguished; fragment labels remain attached to the source records.

Query and download access

PRJNA1097567 Linked; not live-checked

Source context

Counts and their scope

MeasureCountScope or reason unavailable
Independent molecular targetsUndeterminedthis registration

Experimental identity unresolved

Processed source sequence rowsUndeterminedhistorical processed source labels; not public unique sequences

Not yet verified

Retained candidate recordsUndeterminedsum of distinct linked source-target groups; not globally unique sequences

Not yet connected

Round recordsUndeterminedsum of distinct linked source-target groups; not globally unique sequences

Not yet connected

Sequence–round observationsUndeterminedsum of distinct linked source-target groups; not globally unique sequences

Not yet connected

Target-specific read recordsUndeterminedexperiment material matched to this registration

No target-specific count established

Sources and supporting relationships

Source-named target · endo_bindnseq_prjna1097567 · PRJNA1097567

Endogenous RNA bind-n-seq (endo-bind-n-seq): determining RNA interaction motifs of RNA binding proteins isolated from their native environments

Human endogenous, overexpressed and fragment libraries are distinguished; fragment labels remain attached to the source records.

Source record

Samples, libraries and source files (6)

Sample and library labels are preserved from the source. Unresolved labels are not automatically converted into selection rounds.

Run and sampleLibrary labelSource file
SRR28598046
SAMN40872937
GRSF1_Flag_8nt_2nd

Illumina MiSeq sequencing: RNA bind-n-seq on overexpressed GRSF1 (hsa)

SRR28598046.fastq.gz
SRR28598047
SAMN40872936
GRSF1_Flag_8nt_1st

Illumina MiSeq sequencing: RNA bind-n-seq on overexpressed GRSF1 (hsa)

SRR28598047.fastq.gz
SRR28598053
SAMN40872931
GRSF1(134-480)_FB_8nt_2nd

Illumina MiSeq sequencing: RNA bind-n-seq on recombinant GRSF1(134-480) (hsa)

SRR28598053.fastq.gz
SRR28598054
SAMN40872930
GRSF1(134-480)_FB_8nt_1st

Illumina MiSeq sequencing: RNA bind-n-seq on recombinant GRSF1(134-480) (hsa)

SRR28598054.fastq.gz
SRR28598088
SAMN40872943
GRSF1_endo_8nt_2nd

Illumina MiSeq sequencing: RNA bind-n-seq on endogenous GRSF1 (hsa)

SRR28598088.fastq.gz
SRR28598089
SAMN40872942
GRSF1_endo_8nt_1st

Illumina MiSeq sequencing: RNA bind-n-seq on endogenous GRSF1 (hsa)

SRR28598089.fastq.gz

Remaining evidence gaps

Record JSONAll records JSON