PANAPTA:NA:TNBC_breast_cancer_cells:PRJNA558191:R14:019015c2a582

CCTTTGACCAGCAAGAACGTCCTTCCTTGCTGGCTGTCGA
Length
40
log2 fold-change
12.85
P(active)
0.60
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
strong_positive
Monotonicity
0.44

Secondary structure

MFE folding · ViennaRNA · DNA params (Mathews 2004)
folding… ~ 1 ms · result is cached in DB
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Round-level enrichment trajectory

Counts (raw read abundance) and frequency (normalised within each round).

Round # Count Frequency
R0 0 0 0.000e+00
R3 3 0 0.000e+00
R5 5 1 9.320e-05
R7 7 2 1.323e-05
R9 9 17 1.522e-05
R10 10 31 1.462e-05
R11 11 27 3.165e-05
R12 12 296 1.516e-04
R13 13 357 2.630e-04
R14 14 1,847 7.400e-04