PANAPTA:NA:TNBC_breast_cancer_cells:PRJNA558191:R14:706559b5f5ca

TCTCTCCTCTTGCGCGCCGATGTGTCCACCAGCCGTCATG
Length
40
log2 fold-change
13.29
P(active)
0.50
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
positive
Monotonicity
0.00

Secondary structure

MFE folding · ViennaRNA · DNA params (Mathews 2004)
folding… ~ 1 ms · result is cached in DB
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Round-level enrichment trajectory

Counts (raw read abundance) and frequency (normalised within each round).

Round # Count Frequency
R0 0 0 0.000e+00
R3 3 0 0.000e+00
R5 5 3 2.796e-04
R7 7 15 9.919e-05
R9 9 76 6.803e-05
R10 10 129 6.082e-05
R11 11 153 1.794e-04
R12 12 1,139 5.833e-04
R13 13 640 4.715e-04
R14 14 2,504 1.003e-03