PANAPTA:NA:TNBC_breast_cancer_cells:PRJNA558191:R14:dad2351e4e18
TGTGCATGACTAGCGGTTCGCGTTTGGTCGTGCGCGACAC
Length
40
log2 fold-change
13.81
P(active)
0.45
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
strong_positive
Monotonicity
0.44
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
folding…
~ 1 ms · result is cached in DB
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R0 | 0 | 0 | 0.000e+00 |
| R3 | 3 | 0 | 0.000e+00 |
| R5 | 5 | 2 | 1.864e-04 |
| R7 | 7 | 14 | 9.258e-05 |
| R9 | 9 | 99 | 8.862e-05 |
| R10 | 10 | 248 | 1.169e-04 |
| R11 | 11 | 138 | 1.618e-04 |
| R12 | 12 | 741 | 3.795e-04 |
| R13 | 13 | 967 | 7.124e-04 |
| R14 | 14 | 3,592 | 1.439e-03 |