PANAPTA:P08581:c-MET:LOCAL:R20:9acba5bf4703
ACGGCGACACCAGCCTCCCGCACTGCCCCCCCCACAACC
Length
39
log2 fold-change
8.93
P(active)
0.61
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
strong_positive
Monotonicity
0.50
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
ACGGCGACACCAGCCTCCCGCACTGCCCCCCCCACAACC ..(((.......)))........................
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-1.40
kcal/mol
Number of base pairs:
3
Length: 39 nt
Interactive 2D — drag any nucleotide · scroll to zoom · pan with mouse
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R4 | 4 | 1 | 6.937e-08 |
| R8 | 8 | 2 | 1.457e-07 |
| R12 | 12 | 1 | 4.760e-08 |
| R16 | 16 | 80 | 5.033e-06 |
| R20 | 20 | 1,371 | 8.249e-05 |