PANAPTA:P0DJI8:SAA:LOCAL:R9:f55988152943
CTAGGAGTCCAGTGGACAGGATTTATCGGTTTGGTAGT
Length
38
log2 fold-change
21.38
P(active)
0.78
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
strong_positive
Monotonicity
0.80
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
CTAGGAGTCCAGTGGACAGGATTTATCGGTTTGGTAGT ......((((...)))).....................
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-2.10
kcal/mol
Number of base pairs:
4
Length: 38 nt
Interactive 2D — drag any nucleotide · scroll to zoom · pan with mouse
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R1 | 1 | 0 | 0.000e+00 |
| R3 | 3 | 0 | 0.000e+00 |
| R5 | 5 | 7 | 6.257e-05 |
| R7 | 7 | 9,416 | 6.449e-02 |
| R8 | 8 | 22,913 | 1.675e-01 |
| R9 | 9 | 32,134 | 2.731e-01 |