PANAPTA:P18847:ATF3_ISX:PRJEB66722:R3:cb8f135eab27
CATACCGATATTCCCACATTGCGTTGCATAATTTCTGCGT
Length
40
log2 fold-change
—
Enrichment class
—
Monotonicity
—
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
CATACCGATATTCCCACATTGCGTTGCATAATTTCTGCGT .........................(((.......)))..
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-0.80
kcal/mol
Number of base pairs:
3
Length: 40 nt
Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R3 | 3 | 22 | 9.728e-05 |