PANAPTA:P29279:CTGF:LOCAL:R20:d21c7ca41821
ACATGCTCACTCCTCATTCCACCTTGTCCTCCCTC
Length
35
log2 fold-change
13.51
P(active)
0.50
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
strong_positive
Monotonicity
0.80
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
ACATGCTCACTCCTCATTCCACCTTGTCCTCCCTC ...................................
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
0.00
kcal/mol
Number of base pairs:
0
Length: 35 nt
Interactive 2D — drag any nucleotide · scroll to zoom · pan with mouse
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R2 | 2 | 0 | 0.000e+00 |
| R5 | 5 | 0 | 0.000e+00 |
| R9 | 9 | 28 | 2.346e-06 |
| R12 | 12 | 47 | 4.422e-06 |
| R16 | 16 | 1,181 | 1.001e-04 |
| R20 | 20 | 14,748 | 1.164e-03 |