PANAPTA:Q5TGY3:AHDC1:PRJEB61115:R3:466d7f91b152
GGGATGTCGTCACTGATCGCTGTGATTGAGACGGCCTCGG
Length
40
log2 fold-change
—
P(active)
—
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
—
Monotonicity
—
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
GGGATGTCGTCACTGATCGCTGTGATTGAGACGGCCTCGG .((.(((((((((.(....).)))))...)))).))....
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-4.90
kcal/mol
Number of base pairs:
12
Length: 40 nt
Interactive 2D — drag any nucleotide · scroll to zoom · pan with mouse
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R3 | 3 | 39 | 2.788e-03 |