PANAPTA:Q7Z591:AKNA:PRJEB61115:R4:11f383f91a75
TTACGGTTGGTTTTAGCGCAAGGTCGGTAGCAGAGAATGA
Length
40
log2 fold-change
16.25
P(active)
0.12
DeepAptamer binary classifier (sigmoid logit, threshold log2FC>2)
Enrichment class
strong_positive
Monotonicity
1.00
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
TTACGGTTGGTTTTAGCGCAAGGTCGGTAGCAGAGAATGA .............((.((......)).))...........
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-1.00
kcal/mol
Number of base pairs:
4
Length: 40 nt
Interactive 2D — drag any nucleotide · scroll to zoom · pan with mouse
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R1 | 1 | 0 | 0.000e+00 |
| R4 | 4 | 326 | 7.792e-03 |