PANAPTA:Q8N123:CPXCR1:PRJEB61115:R1:63779b9cc608
TTAGTGGTCGTTTGCGCGGATGACTGGTATGGCCTGAGCG
Length
40
log2 fold-change
—
Enrichment class
—
Monotonicity
—
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
TTAGTGGTCGTTTGCGCGGATGACTGGTATGGCCTGAGCG .((.(((((((((....))))))))).))..((....)).
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-1.20
kcal/mol
Number of base pairs:
13
Length: 40 nt
Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R1 | 1 | 6 | 1.881e-04 |