PANAPTA:Q8WYP5:AHCTF1:PRJEB76622:R4:67dc49e3aaae
CTCCTCCGCCCTCTCCGATCCGTCGTCCTCCCCGCTCCTCCGCCCTCCCAGTTCCTCCGC
Length
60
log2 fold-change
16.33
P(active)
0.75
Released DeepAptamer selection-enrichment score; not a binding probability
Enrichment class
strong_positive
Monotonicity
1.00
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
CTCCTCCGCCCTCTCCGATCCGTCGTCCTCCCCGCTCCTCCGCCCTCCCAGTTCCTCCGC ...............(((....)))...................................
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-1.20
kcal/mol
Number of base pairs:
3
Length: 60 nt
Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R1 | 1 | 0 | 0.000e+00 |
| R3 | 3 | 2,667 | 3.328e-03 |
| R4 | 4 | 16,757 | 8.235e-03 |