PANAPTA:Q96QS3:ARX_TBX21:PRJEB66722:R3:52547b56b0cf
CAAGGTGTTAATCCCAATTCACGCCTCGCCAACGCGCACC
Length
40
log2 fold-change
—
Enrichment class
—
Monotonicity
—
Secondary structure
MFE folding · ViennaRNA · DNA params (Mathews 2004)
CAAGGTGTTAATCCCAATTCACGCCTCGCCAACGCGCACC ..((((((.(((....))).))))))(((....)))....
Top row = sequence (5′→3′). Bottom row = dot-bracket pairing.
A pair of matching
( / ) denotes a base
pair; . denotes an unpaired position.
MFE ΔG
-5.60
kcal/mol
Number of base pairs:
12
Length: 40 nt
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Round-level enrichment trajectory
Counts (raw read abundance) and frequency (normalised within each round).
| Round | # | Count | Frequency |
|---|---|---|---|
| R3 | 3 | 105 | 5.087e-04 |