P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502310

DNAFOXR04

Reads
401,429
Distinct strings in file
398,282
File size
5.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502310
Sample:
SAMEA113565952
SHA-256
bee9f4fb902608fc3009b996233dbc0afb9a52d30ba0e576edb53b3c74e09d03

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATTACCCCAGATCAGTTCAGCGGATCGTGTCTTAATAAACAATAAACAAACAAATATTGATGCGGAATTCAGT12.4911e-06
AAAATTCAACCATATCAGTAAACAGCAACCTGAAAATATTGTTAATTTCTAAATGTTAATTCAAGCCGAATTCACA12.4911e-06
AAAATTCACGCAGATCAGTTCAGCGGTCGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGATAAATG12.4911e-06
AAAATTCAGCCAGATCAGTTCAGCGGAACGTGACTGGCTGGGAGGGGCTGAGGCCGGCGGGTATGCGCAATTCAGT12.4911e-06
AAAATTCCATCAGATCAGTTCAGCGGATCGTGTCTGTTTGTCTTAGGGTTGTATTTTATATGATGCGGAATTCAGT12.4911e-06
AAAATTCCCGCAGATCAGTTCAGCGGATCGTGTCTTTTTGTTTGTTTATTTTTTTTTTATTGATGCGGAATTCAGT12.4911e-06
AAAATTCCCGCAGGTCAGTTCAGCGGATCGTGTCTTTGTTTTTTTTTTTGTTTTTCTAATGATGCGGAATTCAGTG12.4911e-06
AAAATTCGAGCAGATCAGTTCAGCGGATCGTGTCTGTTTACTGTTGTTGTCCTTTTGTTTTGATGCGGAATTCAGT12.4911e-06
AAAATTCGCCCAGATCAGTTCAGCGGATCGTGTCTCCCCCACCCCGATGTACCCCACTCCTGATGCGGAATTCAGT12.4911e-06
AAAATTCGGGCAGATCAGTTCAGCGGATCGTGTCTTTATTTATGTTTGTTTGTTTTTTCGTGATGCGGAATTCAGT12.4911e-06
AAAATTCGGGCAGATCAGTTCAGCGGATCGTGTCTTTTTTGTTTATTGTTTTGGTATTTTGATGCGGAATTCAGTG12.4911e-06
AAAATTCGGTCAGATCAGTTCAGCGGATCGTGTCTGCCGGGACTCGATGGTTATTCTTTAGATGCGGAATTCAGTG12.4911e-06
AAAATTCGTGCAGATCAGTTCAGCGGATCGTGTCTGTTTGTTTGTTTTTATTTTCGTTGTTGATGCGGAATTCAGT12.4911e-06
AAAATTCTCCCAGATCAGTTCAGCGGATCGTGTCTTGTGTATGTATGGGTTTGTTTGTTTTGATGCGGAATTCAGT12.4911e-06
AAAATTCTCGCAGATCAGTTCAGCGGATCGTGTCTATAATATGAATCATGTTTGGTTTCCGGATGCGGAATTCAGT24.9822e-06
AAAATTCTCGCAGATCAGTTCAGCGGATCGTGTCTTTTGTTTGTTTGTTTACATAAAAGAAGATGCGGAATTCAGT12.4911e-06
AAAATTCTGCCAGATCAGTTCAGCGGATCGTGTCTACTCGGGGGATGTGGGACGTGGACTGATGCGGAATTCAGTG12.4911e-06
AAAATTCTTTCAGATCAGTTCAGCGGATCGTGTCTCATTAGTTTGGTTTTGATTTCTTTTTGATGCGGAATTCAGT12.4911e-06
AAAATTGAACCATATCAGTAAACAGCATCTAGAAAACTAGAAAACACTAAACCACCATAAACAAAACGAATTCACA12.4911e-06
AAAATTGACCCAGATCAGTTCAGCGGATCGTGTCTCTTTATTGTTTTTTTTTTTTTTTGGGATGCGGAATTAAGTG12.4911e-06
AAAATTGACCCAGATCAGTTCAGCGGATCGTGTCTTTTTGTTTGTTTGTTTTTGTGTTATAGATGCGGAATTCAGT12.4911e-06
AAAATTGAGACAATCAGTTCAGCGGATCGTGTCTTGGTTTTTGTTTTGTTTGTTTTTTTGGATGCGGAATTCAGTG12.4911e-06
AAAATTGCAGCAGATCAGTTCAGCGGATCGTGTCTTCCCTTCTACGCCTGGATTTGCTACTGATGCGGAATTCAGT12.4911e-06
AAAATTGCCGCAGATCAGTTCAGCGGATCGTGTCTTTTCACGATTCTAGGTCCTCGTCTTGGATGCGGAATTCAGT12.4911e-06
AAAATTGCTCCAGATCAGTTCAGCGGATCGTGTCTTTTTGTTTGTTTTTTTTGCCTTTGTTGATGCGGAATTCAGT12.4911e-06

Read fractions use all reads in this source file as the denominator.