P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502319

RNAFOXR01

Reads
439,080
Distinct strings in file
437,328
File size
9.0 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502319
Sample:
SAMEA113565961
SHA-256
78a4ae6fda014fd6341806ceb56809913be1915394a791e247bd23e0f4262d25

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAGAGGTGCTGTGTATCCCCACCTGAGGTCGGAAAGTGCGGTGGCTGTCAGCCTCAACACATACTCTCTCACATCGGTACAG12.27749e-06
AAAAAGAGGTTGTCTAGTATGCCCAGCGGAACATGAAGATGGAAAGTGGGTCAGCCTCAACAGATACTCTCTCACATCGGATCAG12.27749e-06
AAAAAGATAAGCTCATCATCGTATCCGGTCCCCATTCCATCAGTACTCGTTCAACCTCTATGTATACTCTCTCACATCGCTTCTG12.27749e-06
AAAAAGATAGCACAATACAATTGACGACGAACAAAGCGTACCTGCCAGACTCAGCCTCAACACATACTCTCTCACATCGGTTGAG12.27749e-06
AAAAAGATTAATGACATAAGAACAAGCTCCGGAAGGAGGATTCGTATGGGTCAGCCTCAACAGATACTCTCCCACATCGGATGAG12.27749e-06
AAAAAGATTTTGTAGGGCAAATCATAAAAAACATCGTAAAACAAGCCCGCTCAATCTCAACACATACTCTCTCACATCGCATGTA12.27749e-06
AAAAAGCAACACGGATAATTACACATTTTTACACTGCCCTGGGGTACAAGTCAGTCTCAACACATACTCTCTCACATCGGTTCAG12.27749e-06
AAAAAGCACACCATGGATTTGTCGGTCGCGTCGGTAAATCTTTATGAACGTCAGCCTCTACAGATACTCTCTCAGATCGGATGAG12.27749e-06
AAAAAGCACCTCAGTCAAATGATTCTTACTAACGAGCTAAACCGTCCCCTTCAGCCTCAAAGGATACTCTCCCAGATCGGATGAG12.27749e-06
AAAAAGCACTAATCAAATAGTGAGCAATGCCACGTCGGGGTATAAACCTGTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.27749e-06
AAAAAGCAGCAGTGTAGACGAATTATGGGTTATTCGGCTGGGTATAGGGTTCAGCCTCAACACATACTCTCTCACATCGATTGTA12.27749e-06
AAAAAGCAGCAGTGTAGACGAATTATGGGTTATTCGGCTGGGTATAGGGTTCTGTCTCTACACACACTCTCTCACATCGTGTGTA12.27749e-06
AAAAAGCAGGACATTTGCTGTGTGTAAGTCAGCCCGGAATAAGATGGAACTCAGTCTCAACACATACTCTCTCACATCACTTGCG12.27749e-06
AAAAAGCAGTTGCAAACAGTGAAAAAGGCATTATGGGCGGCGCTACTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAGCACA12.27749e-06
AAAAAGCATAAACCCAGCTGATGTCTCGGGGGGAAAAGACGGAATGGTGTCAGTTTCAACACATACTCTCCCACATCACTTCTGT12.27749e-06
AAAAAGCATAGCCGCAAGGTACTATAGAGGCTCGACTATATACACCCCCGTCAGCCTCAACACATACTCTCCCAGATCGGAAGAG12.27749e-06
AAAAAGCATTATTACTAATTTCCTCGTTTCCTCCCACAGCCCGACCGCGTTCAGCCTCTACACATACTCTCTCACATCGGATGAG12.27749e-06
AAAAAGCCAGCCTACTCATTCATACGGAGTATACGGACGCAGAGTCCGTTTCTATCTCTATTCATACTCTCTCACATCGCTTCTA12.27749e-06
AAAAAGCCATTTCCTCCCCATGGCGATGGTAGGAAGTGATGGCCAGGCCCTCAGCCTCAACACATACTCTCTCACATCGGATGTG12.27749e-06
AAAAAGCCCGCAAGGCAAACATGCAAAGACAAAGACAGGGCTCGTGCGGCTCAATCTCTACACATACTCTTTCACATCGCTTCTA12.27749e-06
AAAAAGCCGCATAACCCCGTCATTCCGATTGCGTGAGACGATCTGTAGATTCAGCCTCAACGGATACTCTCCCAGATCGGATGAG12.27749e-06
AAAAAGCCGCATACCGTAGTAGAAGCATTAGCCCGTCCTATTCTGCGCCTTCAGCCTCAACACATACTCTCCCAGATCGCATGAG12.27749e-06
AAAAAGCCGCATACCGTAGTAGAAGCATTAGCCCGTCCTATTCTGCGCCTTCTACCTCTATTCATATTCTTTCATTTCACTTTTG12.27749e-06
AAAAAGCCTAACGCCTATTCTAAAATCAAGGTACTGAATCAGATCTCGACTCAGCCTCAACACATACTCTCCCACATCGCATGAA12.27749e-06
AAAAAGCCTAACGCCTATTCTAAAATCAAGGTACTGAATCAGATCTCGACTCAGCCTCAACACATACTCTCTCACATCGCATCTA12.27749e-06

Read fractions use all reads in this source file as the denominator.