P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502319

RNAFOXR01

Reads
439,080
Distinct strings in file
437,328
File size
9.0 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502319
Sample:
SAMEA113565961
SHA-256
78a4ae6fda014fd6341806ceb56809913be1915394a791e247bd23e0f4262d25

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAACGGGGTAAGTAGCCCTGGGCGACCACCATTCATTTCAAGAACAGAGCTCAGCCTCAACGGATACTCTCTCAGATCGGAAGAG12.27749e-06
AAACGGGGTCCAAATAACTAAGCACCCTGCGTAACCGTCCGGGCGCGTTCTCAGCCTCAACACATACTCTCTCACATCGGTTCTG12.27749e-06
AAACGGGGTCGATAAGTTGAGTAGCAACGAGAGACTTGAGGGAGCCATGATCAGCCTCAACACATACTCTCTCACATCGGATGAG12.27749e-06
AAACGGGGTCTTATTAAGTCATACATGGTCACAGAGTAGACTTATGTCACTCAGCCTCAACACATACTCTCTCACATCGGATGAA12.27749e-06
AAACGGGTCGTGTTTAAGTAGGCTGGTTATTGAGACAAGTTGGGTCAGTCTCAGCCTCAACAGATACTCTCCCAGATCGGAAGAG12.27749e-06
AAACGGGTGGCTTCAAAATCTCATATGATGGCAAAAACTAGAAAGCGCAGTCAGCCTCAACGGATACTCTCCCAGATCGGATGAG12.27749e-06
AAACGGGTTACACTCATTCAGGGCAATGGAGTCAGGTCGCGATGCGCTAGTCAGCCTCAACGGATACTCTCCCAGATCAGAAGAG12.27749e-06
AAACGGGTTCAGGTACGGTGGGTGTACGGTGTAATGATTAGCGTGGTAAATCAGCCTCAACGGATACTCTCCCACATCGGAAGAG12.27749e-06
AAACGGGTTTACCCCGGAATTACGATCACTCGCCGTGCAATATAATTCAATCAGCCTCAACACATACTCTCCCACATCGGATCAA12.27749e-06
AAACGGGTTTACCCCGGAATTACGATCACTCGCCGTGCAATATAATTCAATCAGCCTCAACAGATACTCTCCCACATCACATGTG12.27749e-06
AAACGGGTTTACCCCGGAATTACGATCACTCGCCGTGCAATATAATTCAATCAGCCTCAACAGATACTCTCCCAGATCGGAAGAG12.27749e-06
AAACGGGTTTACCCCGGAATTACGATCACTCGCCGTGCAATATAATTCAATCAGCCTCAACAGATACTCTCCCAGATCGGATGAG12.27749e-06
AAACGGTAACACTTTTTAGTATGGGTAGATTCGTTTGTTTGCGAATCGGGTCAGCCTCAACAGATACTCTCCCACATCGGATGAG12.27749e-06
AAACGGTACATCGACAGGAGCATGTTCTGTTTGCAATCTCACTCATCCGCTCAGCCTCAACAGATACTCTCTCAGATCGGATGAG12.27749e-06
AAACGGTACGATCAGCCATCATGCTAGAACAGGGGTTGCACTACGAATCTTCAGCCTTAACGGATACTCTCCCAGATCGGAAGAG12.27749e-06
AAACGGTACGCTCTGCTTGTCTCTACGGTGACCTGGGGTTCGTTTAATTGTCAATCTCAATTCATATTCTCTCACATCAGTTCTA12.27749e-06
AAACGGTATCCACTCAAGGTATCTTAGGGAGGAAAGGGTACCCAGGTGCGTCAGCCTCAACAGATACTCTTTCACATCGGATGTG12.27749e-06
AAACGGTCAATCCGGGATGTCGTTCCTCATAATACATAGGGATATTTCTCTCAACCTCTACACATACTCTCTCACATCACTTCTA12.27749e-06
AAACGGTCACCCTGAACACCCCTTGCCCACACCTAAAAGCCCACTAGTAATCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.27749e-06
AAACGGTCACCGTGGCCCTAAGGGGATATTATCAAGGAGTTCATCATAGCTCAGCCTCAACAGATACTCTCCCACATCGGTTGAA12.27749e-06
AAACGGTCACCGTGGCCCTAAGGGGATATTATCAAGGAGTTCATCATAGCTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.27749e-06
AAACGGTCAGATCGATCGTATTAGAAGTATTTGACCCTGGGATTTGCCACTCAGCCTCAACACATACTCTCCCACATCGGATGAA12.27749e-06
AAACGGTCAGATCGATCGTATTAGAAGTATTTGACCCTGGGATTTGCCACTCAGCCTCAACGCATACTCTCCCAGATCGCTTCAA12.27749e-06
AAACGGTCATGACCGCGCAGTAGTATAGACGCGAAACTACTCTTACCACTTCAGCCTCAACGGATACTCTCCCAGATCGGATCAG12.27749e-06
AAACGGTCCAACGTTGAAGAACAATGCGGACTACCGCAGTACTATAGAAGTCAACCTCTACACATACTCTCTCACATCGCATGTG12.27749e-06

Read fractions use all reads in this source file as the denominator.