P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502321

RNAFOXR03

Reads
454,930
Distinct strings in file
451,548
File size
9.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502321
Sample:
SAMEA113565963
SHA-256
d6e0204fa5a69d16b49f7b26241407edb2a1c1d5daad9e1a2f6e024076ffbc0b

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGGAGTAAAGCCCGCGTCCCGGATCCCGCCCATGTAAAATCTCTGTGTCAGTCTCAACACATACTCTCTCACTTCACTTCAGC12.19814e-06
AAAGGAGTACTGGGATCCCCACCAGAAATTCCCCCGTTGTGGAGTGCCCCTCAGCCTCTACACATACTCTCTCAGATCGCTTCTG12.19814e-06
AAAGGAGTCCCACACACCATATAAATAACTTACATATCACACCCTGCCCATCAGCCTCAACGGATACTCTCTCACATCGGAAGAG12.19814e-06
AAAGGATATCTGAATTAAAACTTTAAATAGGGTCCCTCCCTACCCCGGTATCAGCCTCTACAGATACTCTCCCAGATCGCTTCAA12.19814e-06
AAAGGATATTGAGCGATCGCTAAAAGCTAACTCGTCCATATCATTGTACCTCAGCCTCAACGGATACTCTCCCACATCGGATGAG12.19814e-06
AAAGGATCATTGTTCCCAAGACAGTGCCAAACAGAACAGAACACCTCACATCAGCCTCTACACATACTCTCTCACATCACTTCTA12.19814e-06
AAAGGATCCTGCGTAGCCCTACTCTTACGCCCTCCCTCCATCATACCTATTCAATCTCTATACATACTCTTTCTCATTTCTACTG12.19814e-06
AAAGGATCGAGGCAATAGACTAATTATAAACCAGTAACCCTCCCACTGACTCAGCCTCTACACATACTCTCTCACATCGGTTGAG12.19814e-06
AAAGGATCGATCGGACCCACCTCTCCCGCCTCGTCGCGATTTGGTCCGGCTCAGCCTCAACGCATACTCTCTCACATCGGATGAG12.19814e-06
AAAGGATGCACAAGTGTTGTTGTCACTACGTGGTGCCCTAACCCCTCCTCAGCTTCAACGGATACTCTCCCAGTTCGATTCTGCT12.19814e-06
AAAGGATGTAACCCCTACCCTTTTACCCTTGTTCCCATACCAACCCGCATTCAGCCTCAACACATACTCTCCCACATCGGTTCAG12.19814e-06
AAAGGATTCCCTTCCCATCCCAGTCTATCCTGCAGCGGCCGGTGTCAAACTCAGCCTCAACAGATACTCTCCCAGATCGGAAGAG12.19814e-06
AAAGGCAAAGCGGAATCTTGCTAGGACTGAAAATGAAACCTGCGGAGCACTCAGCCTCAACACATACTCTCTCACATCGGTTCAG12.19814e-06
AAAGGCAAATCTTGAAGCGGAAAGTCCATACGAAGCTTAATAGCCCTCCCTCAATCTCTACACATACTCTTTCACATCCCTTCTT12.19814e-06
AAAGGCAACCCAATCTCCCAATCCCCCTGGGTACATTGTCCGTCATACAATCAACCTCAACGGATACTCTCCCACATCGGAAGAG12.19814e-06
AAAGGCAACCCCTCTTCCTCTGCAGTGTGTTACAGGCGCCCTGCCCACCCTCTACCTCTACTCATACTCTTTCTCATTTCTTGTA12.19814e-06
AAAGGCAACTGAACCCTCCCTGTTTGACCCTCCCGTCACCCTAATCCATATCAACCTCTACACATACTCTCTCACATCCCAAGTG12.19814e-06
AAAGGCAACTGAACCCTCCCTGTTTGACCCTCCCGTCACCCTAATCCATATCAGCCTCAACGGATACTCTCCCACATCGGAAGAG12.19814e-06
AAAGGCAACTGAACCCTCCCTGTTTGACCCTCCCGTCACCCTAATCCATATCAGTCTCTACACATACTCTCCCACATCGGATGAG12.19814e-06
AAAGGCAACTGTAACATCACGACTGGAAATCCCACCCTACCCCGGGTATCTCTACCTCTATGGATTCTCTTTCTCATTCGAAGAG12.19814e-06
AAAGGCACAAGCGCCCTCCCATCGATGCCCACCCTCTGCCTGCTCTAAGTTTTATCTCTATTCATACTCTTTCTCATTTCTTCAA12.19814e-06
AAAGGCACAAGCGCCCTCCCATCGATGCCCACCCTCTGCCTGCTCTAAGTTTTATCTCTATTCATACTCTTTCTCATTTCTTCTA12.19814e-06
AAAGGCACACCCTCACCCACCCAATAATCCTCCCAACACTAAGGACCGCGTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.19814e-06
AAAGGCACTCATGATCCAGCATTGGTACTTACGTTCATCCTCACCCGCCTCAGTCTCAACACATACTCTCCCAGATCGCATCAGT12.19814e-06
AAAGGCAGACGCTAGTAAATACTCCCCATGTTCATTTGTAGGTCCCTCCCTCAGCCTCAACACATATTCTCCCAAATCGGTTGAG12.19814e-06

Read fractions use all reads in this source file as the denominator.