P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502322

RNAFOXR04

Reads
485,460
Distinct strings in file
446,571
File size
7.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502322
Sample:
SAMEA113565964
SHA-256
71d86680daea376fca2691a5ef830af19184753d488282020698b34d43d3a8b6

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAATCATACATCCCACGATATTTACCCTCCCTTCCCTCACTTCTCCGTTCAACCTCTACACATACTCTCTCACATCGCATGAA12.0599e-06
AAAAATCATTGTAACCCTCCCTCCCGGCACGTTGAAGCGGGAGATCTGTGTAAGCATCAACGGATACTCTCTCACATCGGAAGAG12.0599e-06
AAAAATCATTGTAACCCTCCCTCCCGGCACGTTGAAGCGGGAGATCTGTGTCAGCCTCAACAGATTTTTTTTCTTATTCCAAAAG12.0599e-06
AAAAATCCACACCCTATTCAAATATCTCAACTGGTTCTCCCAATCCCTCCTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.0599e-06
AAAAATCCAGACGTAGAAAAGCAAGCATAACCGGGCGTCGCCCACCCCCCTCTATCTCTATTCATACTTTTTCTCATTTCTTCTA12.0599e-06
AAAAATCCCACATCCCTCGCCCCGCCTGCCTTCTCTCTCCTTCCAATCTGTCAGCCTCAACGGATACTCTCCCACATCGGATGAG12.0599e-06
AAAAATCCTTCGCAGGGAATCAATTTGAATAAACCCTTCCCTCCCCAGTCTCAGCCTCAACACATACTCTCCCAGATCGGTTGAG12.0599e-06
AAAAATCGGGAAGGGCGCTGGCTGATCTTGATCTGCGTCGTATTCCCACCTCAGCCTCAACGGATACTCTCCCACATCGGAAGAG12.0599e-06
AAAAATCGGTGCGTAAAACTGCAGATCGGTGATAACCCTAAACCCTTCCCTCAGCCTCAACAGATACTCTCCCACATCGGATGAG12.0599e-06
AAAAATCTCACCCAGGCAACCCCTTCCCTTCGGTACCCTTGCCCATTGTCTCAACCTCTACACATACTCTCTCACATCGGTACAG12.0599e-06
AAAAATCTGTACCACAACACATGGGCCGAGTCCTCCCGACCCGCCCTCTCTCTACCTCTACTCATACTCTCTCTCATTCCTTCTA12.0599e-06
AAAAATGAGTGGTACACAGTAACAGTAAAGGCCCTCCCACCCTTAGAGCTTCAGCCTCAACGGATACTCTCTCACATCGGAAGAG12.0599e-06
AAAAATGATAGTGTTCTACTCAGTCCTATTATATTCCCACCCTCCCGGAATCAATCTCTACTCATACTCTCTCTCATCTCTTCTA12.0599e-06
AAAAATGATTGAGAGCGCAGTTTATTCCTTTCTCGCGTCGTCCACCCGCCTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.0599e-06
AAAAATGATTGAGAGCGCAGTTTATTCCTTTCTCGCGTCGTCCACCCGCCTCAGCCTCTACACATACTCTCTCACATCGCATCAG12.0599e-06
AAAAATGCAAGCGTCTGACTAACTACGTCGTTGGCGCATCACCACCCACCTCAACCTCTACAGATACTCTCTCACATCGGATGAG12.0599e-06
AAAAATGCATCAGGGTTAACACCACCCACCCTATTCCCTCGTAGATTAATTCAGCCTCAACACATACTCTCTCAGATCGGATGTG12.0599e-06
AAAAATGCCCTTCCCCTTCCCTTGGCCCTATAGAAGATCGATATACCGCCTCAACCTCTACTCATACTCTCTCACATCGCTTCTA12.0599e-06
AAAAATGCGCCCTATAAAACCCCTGCCCTACCCTCATGTGGATGTGGACATCAGTCTCAACACATACTCTCCCAGATCGGATGAG12.0599e-06
AAAAATGCGTCAAACCTAGCTGCCAATCCGCCCACCCGCCTCGATAATTGTCAACCTCTACAGATACTCTCCCACATCGGAAGAG12.0599e-06
AAAAATGCTGACAACTAGAAAACCCGCCCTTCCCTGACTCGGTTGGAGGCTCAACCTCTACACATACTCTCTCACATCGCTTGAT12.0599e-06
AAAAATGCTGACAACTAGAAAACCCGCCCTTCCCTGACTCGGTTGGAGGCTCAGCCTCAACAGATACTCTCTCACATCGCATGAG12.0599e-06
AAAAATGGCTGACATGAACTTTGCTATTATTTCAGGTCGTGTTTCCCCCCTCAGCCTCAACACATACTCTCTCACATCGCATGAG12.0599e-06
AAAAATGGCTGACATGAACTTTGCTATTATTTCAGGTCGTGTTTCCCCCCTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.0599e-06
AAAAATGGTAATGCAATGGTCCTTATTTTTATATGCTACACCCTCCCTCCTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.0599e-06

Read fractions use all reads in this source file as the denominator.