P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502322

RNAFOXR04

Reads
485,460
Distinct strings in file
446,571
File size
7.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502322
Sample:
SAMEA113565964
SHA-256
71d86680daea376fca2691a5ef830af19184753d488282020698b34d43d3a8b6

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCACATCGGAAGAG122.47188e-05
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCACATCGGATCAG24.1198e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCACATCGGATGAG81.64792e-05
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCACATCGGTACAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCAGATCGAACAGC12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG377.62164e-05
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCAGATCGGATGAG112.26589e-05
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCAGATCGGATGTG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCAGATCGGTAGAG24.1198e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCCAGATCGGTTGAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCCTAGATCGGAAGAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCACATCAGAAGAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCACATCAGATGAG24.1198e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCACATCGCATGTG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCACATCGGAAGAG48.23961e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCACATCGGATGAG61.23594e-05
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCACATCGGATGTG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCAGATCGGAAGAG36.17971e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATACTCTCTCAGATCGGATGAG24.1198e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACGGATATTCTCCCACTTCGGAAAAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACTCATACTCTCTCACATCGGATGTG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAACTCATACTCTCTCTCATTGCATGTG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCAATGGATACTCTCCCACATCGGTAGAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCATCACATACTCTCCCACATCGGATGAG12.0599e-06
AAAGAGGTACCCACGAGCCTCCACCATCCGTCCTCCGTCCACCTAATCGGTCAGCCTCTACACATACTCTCCCACATCACATGAG12.0599e-06

Read fractions use all reads in this source file as the denominator.