P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502327

RNAmutFOXR03

Reads
443,397
Distinct strings in file
438,211
File size
8.8 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502327
Sample:
SAMEA113565969
SHA-256
1995af4a1ce95b85eae35a377fdb9c8128f5e4835aa5a0a74dc8212c9203eadf

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATTATTACTTCCTCCGGCCCTCTGCCTTCCCTTCCCCTTGTCAGTTATCAGCCTCAACGGATACTCTCCCACATCGGAAGTG12.25532e-06
AAAATTATTCAGGCTGAGGTCCCGCCCCAGCTTCAAAGCCCGCCCTGTGGTCAACCTCTACCGATACTCTTCCTGATTCGATGAG12.25532e-06
AAAATTATTCGCACATAACGGCCCTCCCCACTAAGAATCCCCCTGCTATTTCAGCCTCAACAGATACTCTCTCACATCGGAAGAG12.25532e-06
AAAATTCAACCCACTTTATCACATCACGTTATACGGAACCCCTCCTCACCTCAACCTCTACTCATACTCTTTCACATCACTTCTA12.25532e-06
AAAATTCAACCCAGTCCCATCACCCCAAAGTTCCTAGTCAGGCATATATTTCAACCTCAACACATACTCTTTCACATTGCATCAG12.25532e-06
AAAATTCAATTCCCTCCTCCTACATCAATCCAAACCCGGCCAGAAGCTCATCAGCCTCAACGGATATTCTCCCAGATCGGAAGAG12.25532e-06
AAAATTCACAGGTAAAATCAATTCGCCCTCCCACCTCGGGACCCATGCAATCAGCCTCAACGCATACTCTCTCAGATCGGTTGAG12.25532e-06
AAAATTCACATTACTATCCCATTCACCCATACCCCGCGTCCGTGGCACACTCAGCCTCTACACATACTCTCTCACATCGGTTCAG12.25532e-06
AAAATTCACCAACAATTCCTATCGCTATCTTGCTTTCCCTGCCCTACCCTTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.25532e-06
AAAATTCACCATACAGATTCCATTTGCTCAGTAGCCCTCCCGCCCCAGCATCTATCTCTATTCATACTCTTTTTCATTTCTTCTT12.25532e-06
AAAATTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCACATCACGTATGCTGTCTT12.25532e-06
AAAATTCAGTGAGGAAGCGGTTCCGGAAGAAATATCCCGCCCGCCCTAGTTCAGCCTCAACAGATATTCTTTCTTATTAGATATG12.25532e-06
AAAATTCAGTGTAGTAATTAAATCGTAGCCCATCCCGCCCGCAGTGCACCTCAATCTCTATACATACTCTCTCACATCACTTCTA12.25532e-06
AAAATTCATAGAAGTTACGCCAAGCTAAGAAGAGCTACTGAGGAGGTCCGTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG12.25532e-06
AAAATTCATATGTTGTCTTTACATTCACACCAATAACCACCCATCCCACTCAGTTTCAACAGATACTCTCCTAGATCACTTCAGC12.25532e-06
AAAATTCATTGCTGACTTGAGATTCAGCCAGTACCCTTCCCTGCCCTGTATCAGCCTCAACACATACTCTCTCAGATCGGATGAG12.25532e-06
AAAATTCCAATCCCTTCCCTAAACCTCGATATCCTTAATACAGCAAACTGTCAACCTCAACACATACTCTCTCACATCGCATCAA12.25532e-06
AAAATTCCACCCTCGGACCACCCACTTATTAATTCTGGCGTACACACATCTCAGCCTCAACACATACTCTCTCACATCACTTCAA12.25532e-06
AAAATTCCACCTCTCCTCATCCTTTCCCTCATCCAACCTTCATGTAATTATCTATCTCTATTCATACTCTTTCTCATTCCTTCTA12.25532e-06
AAAATTCCACGCGCACCGATTAGACCAACTCTTTAGATCGGAATGTACATTCAACCTCTACACATACTCTCTCACATCGCTTCTA12.25532e-06
AAAATTCCATAATAAATAATGCATAAACCCTCTTCTCGCCCATTTTCCCCTCAACCTCTATACATACTCTCTCACATCGGTTCAA12.25532e-06
AAAATTCCATTATGGTGCAGCCTGTTTTATGCCCTTACCCTCAACCAATATCAACCTCAATACATACTCTCTCACATCACATTTG12.25532e-06
AAAATTCCCAACCCATGCCAACTCCACTTACGTTCTGCCTGCTGTCCTCTCAGTCTCAACAGATACTCTCCCAGATCGGTAGAGC12.25532e-06
AAAATTCCCAACGCCCTATTTCCCACTGTCATTTGCGCCGTTCCCCTTCTTCAGCCTCAACAGATACTCTCTCAGATCGGATGTG12.25532e-06
AAAATTCCCACTCGGCTACGTTAAGGCCCACTTCCCAACCCAAAACCTCCTCAACCTCAACGGATACTCTCCCAGATCGGATGAG12.25532e-06

Read fractions use all reads in this source file as the denominator.