P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGAAGAGCTGTCAGATTAGTCTATTAGCGTCATGTTCCACCCCACCTCAGCCTCAACGGATACTCTCCCAGATCGGAAGTG11.98273e-06
AAAAGGAAGTCATGCCAAATGGAGATCGGTAAGCCCTCCCACCCGGTACTTCAACCTCTACACATACTCTCCCACATCGCTTGAG11.98273e-06
AAAAGGAAGTCATGCCAAATGGAGATCGGTAAGCCCTCCCACCCGGTACTTCAGCCTCAACGCATACTCTCTCACATCGCATGAG11.98273e-06
AAAAGGAATAGCGTACGGATAAAGATAGCTAGTCACGTCGTCCACCCACTCAGTCTCAACACATACTCTCTCACATCACTTCAGT11.98273e-06
AAAAGGACCCTCCACGACCCCCCACGAACGTCGTTTTTTAATCTCATGCGTCAGCCTCAACACATACTCTCTCACATCGGATGAG11.98273e-06
AAAAGGACGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAATCTCTACACATACTCTCTCTCATCCCTTCAA11.98273e-06
AAAAGGACGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACACATACTCTCCCAGATCGGAAGAG11.98273e-06
AAAAGGACGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCACATCGGAAGAG11.98273e-06
AAAAGGACGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCTATCTCTACTCATACTCTCTCTCATTACTTCTA11.98273e-06
AAAAGGACGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCTGCCTCTACACATACTCTCTCACATCCGTACAG11.98273e-06
AAAAGGAGTGAATATCTCCCTCCCTCCCCATATCCGTTCTTAGGCCTGGCTCAACCTCTACCCATACTCTCCCAGATCGGATCAG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAACTCAGCCTCAACACATACTCTCTCACATCGGATGTG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCAACACATACTCTCTCACATCGCATGTG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCAACACATACTCTTCCACATCGCTTGTG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACACATACTCTCTCACATCGCTTCAA11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACACATACTCTCTCACATCGCTTGAG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACACATACTCTCTCACATCGGTTCAA11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACACATTTTTTTTCTTATTCCATTTG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACTCATACTCTCTCACATCAGTTCAG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACTCATACTCTCTCAGATCAGTTCAG11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACTCATACTCTTTCACATCTCTTCTA11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAATCTCTACACATACTCTCTCACATCGCTTGTA11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAATCTCTACACATACTCTCTCACATCGGTTGAA11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAATCTCTACTCATACTCTCTCACATCGGTTCAA11.98273e-06
AAAAGGCAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAATCTCTACTCATACTCTTTCACATCTCTTCTA11.98273e-06

Read fractions use all reads in this source file as the denominator.