P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGAATGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGGAACAG35.94818e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAA11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG570.000113015
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGGATGAA11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGGATGAG71.38791e-05
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCAGATCGGTAGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCCTGATCGGAAGA11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCCCTCATCGGAAGTG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCACATCCGATGTG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCACATCGGAAGAG173.37064e-05
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCACATCGGATAAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCACATCGGATGAG23.96545e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCACATCGGTAGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCAGATCGGATGAG23.96545e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTCTCATATTCCAATTG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTTCCACATCGGTACAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTTCCAGATCGGAAGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTCTTTCACATCTGATGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTTTCCCACATCGGATGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATACTTTCCCAGATCGGAAGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATATTTTCCCAAATCGGAAGAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATTTTTTTTCTTATTCCATAAG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACGGATTTTTTTTCTTATTCGAAATG11.98273e-06
AAAAGGGCGTCAAACGTATCCTCCACCATCCTACCTCCACCATCCCGTCGTCAGCCTCAACTGATACTCTCCCACATCGCAAGAG11.98273e-06

Read fractions use all reads in this source file as the denominator.