P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGCTTGTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGAACAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGAAGAG152.97409e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGAAGTG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATCAA47.93091e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATCAG152.97409e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATGAA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATGAG780.000154653
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATGGC11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATGTA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGATGTG234.56027e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTACAA23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTACAG47.93091e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTACTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTAGAA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTAGAG81.58618e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTAGTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTCAA23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTCAG112.181e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTCTG35.94818e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTGAA23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTGAG275.35336e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTGAT11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGGTTGTG81.58618e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATTGGAAGAG11.98273e-06

Read fractions use all reads in this source file as the denominator.