P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGCATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGCATGAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGCTTCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGCTTGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGAAGAG173.37064e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGAAGTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGATAAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGATGAG377.33609e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGATGTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGTAGAG35.94818e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGTTCAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCACATCGGTTGAG35.94818e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCACAACTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCAGATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCAGATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGAAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGATATAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGCATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGGAACAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGGAACTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGGAAGAG438.52572e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGGAAGTG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGGATGAG305.94818e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATACTCTCCCAGATCGGATGTG11.98273e-06

Read fractions use all reads in this source file as the denominator.