P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGAACAG91.78445e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGAACTG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGAAGAG1120.000222065
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGAAGTG91.78445e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGATGAG560.000111033
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGATGTG91.78445e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGTACAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGTAGAG59.91363e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGTAGTG47.93091e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGTTCTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGTTGAA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATCGGTTGTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCACATTGGAAGTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCAGATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGAAAAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGAACAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGAAGAG203.96545e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGATGAG132.57754e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGTAGAG35.94818e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGTTGAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCATATCGGAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCATGTCAGAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCATGTCGGATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCTCATCGGAAGAG23.96545e-06

Read fractions use all reads in this source file as the denominator.