P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGAGCAATTATCCCAAGTTAGCGCCTACCCTATCCCGCCACCGTGTATCAACCTCAACACATACTCTCTCACATCGCTTGAG11.98273e-06
AAAAGAGCAGAACTGTGACAGTACCAGTGCCAGGTGTCCCAACCCTCCCATCAGCCTCTACGCATACTCTCTCACATCGGATGAG11.98273e-06
AAAAGAGCGTCAAACGCATCCTCCACCATCCTACCTCCACCATCCCGTCGTCTATCTCTACTCATACTCTCTCACATCGCTTCAA11.98273e-06
AAAAGAGCTAGAAAAATAAACCGACGAGCGCGGCCCATCCCAACCCGGTATCAGCCTCAACACATACTCTCCCACATCGCATGAG11.98273e-06
AAAAGAGGTAAACAGCCCAGACCCAGTGCCCTATCCCCACTTGTATTGCGTCAGCCTCAACGGATACTCTCTCACATCGGTTGAG11.98273e-06
AAAAGAGGTCGACATTTACTCTAGATTTATTTATCGTCGCGCCTCCCACCTCAACCTCAACACATACTCTCTCACATCGGTTCAG11.98273e-06
AAAAGAGTGGTCAGGTGTCCACATTTAGGGGGTATCTCAACCCTCCCTCCTCAACCTCTACACATACTCTCTCACATCCATTAAC11.98273e-06
AAAAGAGTTCATGGGTAATCGTGTAGAATTTAACGTCGTTTTACCCCACCTCAATCTCTATTCATATTTTTTCTCATCACTTCAG11.98273e-06
AAAAGAGTTGGTGTAGAATGTGTAGGCATTTCCTCTCCCTCCCGCACGAGTTACTCTCAACTCATACTCTTCTTCATTTCATCTC11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCCTTCCTCCACCTCCAATTCAATTTTTATTTATTTTTTTTTTTTTTATTTTTG11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAACCTCTACACATACTCTCTCACATCGGTTGTG11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCACATGAG11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACACATACTCTCCCACATCGCATGAG11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGATGAG11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCTCAGATCGGATGAG11.98273e-06
AAAAGATAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTTAGCCTCTACACATACTCTCTCACATCGGTTCAG11.98273e-06
AAAAGATAATTCCCTAAACCCCCCCGGTCCGTAGACTGTTGTGGCGGTAATCAGCCTCAACACATACTCTCTCACATCGGATGAG11.98273e-06
AAAAGATAATTCCCTAAACCCCCCCGGTCCGTAGACTGTTGTGGCGGTAATCAGCCTCAACGGATACTCTCCCAGATCGGATGAG11.98273e-06
AAAAGATCATATAAGCTGTCGTTTTCAAATGCGTTCGTGTTCCACCCTCCTCAGCCTCAACAGATACTCTCTCACATCGGAAGAG11.98273e-06
AAAAGATCCCTAGCCCAAACCCAAACAGCCCAATTCCCTCGTTCCCCACGTCTACCTCTACTCATACTCTTTCTCATCCGTTGTA11.98273e-06
AAAAGATGCCGTCCACCTCCTTCCACCGCCGCCAGTTTAACCTTATACTCTCAGCCTCAACGGATACTCTCCCACATCGGATGAG11.98273e-06
AAAAGCAAACCCACCCCTGCGGCCCTTGCCCATACAAGTCGCATAGAACCTCAATCTCTACTCATATTCTCTCACATCTCTTCTA11.98273e-06
AAAAGCAAATTAGTTAAGGAAAGTTCCAGGTACCCGCCCATCCCTAAGTATCAGCCTCAACGGATACTCTCCCAGATCGGATGTG11.98273e-06
AAAAGCAAATTCCCCCCCACCCGGGTTCGGTTAAGGCTAAGAATGTTGGATCTACCTCTATCGATTTTTTTCCTAATTCGAAGAG11.98273e-06
AAAAGCAACACCCTACCCTACCAAGGCCCTTCCCCAACTTTTTTCTTCTCCTCAGCCTCAACGGATACTCTCCCAGATCGGTAGA11.98273e-06

Read fractions use all reads in this source file as the denominator.