These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTATGACATGTCGGATTATGCTGAAGGCGCGTTACAGG | 2 | 3.49822e-05 |
| AACTATGGTGGATGACCGGGGAAATGATGCAAGTGGTCTC | 1 | 1.74911e-05 |
| AACTATGTAGTGTAGTTATACTACGTGTTTTTGTTTCGCC | 1 | 1.74911e-05 |
| AACTATTCTTAGCTGTACTACATTGGTAGAGCGCTAACAT | 1 | 1.74911e-05 |
| AACTATTTAAGGCAGTATAGTGCCATAATGTTTTCTGTAG | 1 | 1.74911e-05 |
| AACTATTTAGACTGCAGGTGCGGCTAGGTGATTAAGGGGG | 1 | 1.74911e-05 |
| AACTCAAGAAGAATAGGTTGGATACCTATGCTGCTCGATG | 1 | 1.74911e-05 |
| AACTCAGAATACTCATTTCATAAGGTGTAGAGAACGTTTG | 1 | 1.74911e-05 |
| AACTCAGATCATTCGAGTGGTTAATGTCATGCAATGTGTG | 1 | 1.74911e-05 |
| AACTCAGTGTAAATGAAACGGAAGCTCGCGGAAGTCTTAG | 1 | 1.74911e-05 |
| AACTCATGCATGCAGTGCATAAGACATTATATTTGCATGG | 1 | 1.74911e-05 |
| AACTCCGCAGGTCAGAGGTGGGCTTTAAGCCCGCCTACCG | 1 | 1.74911e-05 |
| AACTCCGCCCATCACTATGGCCTTCTGCGCCGTTTAAAGC | 1 | 1.74911e-05 |
| AACTCCTATGAGGTGGACTAGCATGAGATACAGTGTGCAC | 2 | 3.49822e-05 |
| AACTCGACGTCGACGTAACGGGGCATGTTTGTCGAGGGGA | 1 | 1.74911e-05 |
| AACTCGATATAAGCCGCTATCTGGTCCTGTGTTTGCGGGA | 1 | 1.74911e-05 |
| AACTCGCAAGGCCCAGGCGTTGAGTTGCTGCTTTAGTTGC | 1 | 1.74911e-05 |
| AACTCGCATGTGACTCCGCTCATAGAATGTGTTGGTTTCG | 1 | 1.74911e-05 |
| AACTCGCTGGGCGGGTCAGGGTTTCCTCACCTTGGTGATA | 1 | 1.74911e-05 |
| AACTCGGCGGTGTAAGGGGGTCGCGCAAACAAGCGGTGCT | 1 | 1.74911e-05 |
| AACTCGGTAGAATCTCGTTTTAAGTACGATCAGTTGTAAT | 1 | 1.74911e-05 |
| AACTCGTCGGTCGCTGAGTTTTTTAGTCCATGCTGTGTAT | 1 | 1.74911e-05 |
| AACTCTAGTTGGTGGGGTGTGCGAGACGGTATTGCGTGGT | 1 | 1.74911e-05 |
| AACTCTCCGGTAGGATATGGATGTAGCAGTCGTATGAGTG | 1 | 1.74911e-05 |
| AACTCTCGACTGTTAGGGTTAGCAAGAATTACATATAGTT | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.