These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCCAGTTTCTGGGCACCACGGATATATTGAGGCGGCGC | 1 | 1.74911e-05 |
| AAGCCATGTGGTGGCATTGCGCGCATGTGCTCGTAGCGCG | 1 | 1.74911e-05 |
| AAGCCATGTTCACGATTTCGTCGGAATATCCGATACCGTA | 2 | 3.49822e-05 |
| AAGCCATTTAATGTAACCTATTCTACATATGTGCCATTGA | 1 | 1.74911e-05 |
| AAGCCCAAAAAGTGGGCTGTTGGCTGATAGGAGGCGGTCG | 1 | 1.74911e-05 |
| AAGCCCAGGTCACTACCTTGGTGAGTGTAGTAGGGAGGTC | 1 | 1.74911e-05 |
| AAGCCCGGAACGGTACCGATGTGTGCAGGATGACAGTAGG | 1 | 1.74911e-05 |
| AAGCCCTAGACATTGGCCACTTTTCGTTGTGGGGAATTAG | 1 | 1.74911e-05 |
| AAGCCCTTGATAAGACGGCTAATTCGCACTAGGGGGCGGG | 1 | 1.74911e-05 |
| AAGCCGACTACGCTTGTCCGTACTGTAAAGGCCTTTGGAC | 1 | 1.74911e-05 |
| AAGCCGAGATATCACCGGTCGTGGTGACTCGCGACACGTG | 1 | 1.74911e-05 |
| AAGCCGCCTGGGGCGAGGGGGTTGTCTGGAGGGGCTGCAG | 1 | 1.74911e-05 |
| AAGCCGCGAGTGCCTGGAATAGAAGGGGTTTGTCCATACG | 1 | 1.74911e-05 |
| AAGCCGCTGACACTAATTGAGTCTGGCTGGGGCTAGTTGA | 1 | 1.74911e-05 |
| AAGCCGGAAGTGAGTTCCGCGTACAGGAGGCCTGTGACCG | 1 | 1.74911e-05 |
| AAGCCGTGAGGGGGGACTATCGTGTACTACTATGGTGGTT | 1 | 1.74911e-05 |
| AAGCCGTGTGCCTACCAAACAGGTGTGCTGGTATATCGGG | 1 | 1.74911e-05 |
| AAGCCGTTGCAGGTTTTGGATAACGCACGGTTGTATGATG | 1 | 1.74911e-05 |
| AAGCCTAATGAGCTCTGAAGTTGTTGAAGAGGGGCAAGGA | 1 | 1.74911e-05 |
| AAGCCTACATCGTTGTTGACGACGTATTTTGGCCGTTTCA | 1 | 1.74911e-05 |
| AAGCCTACTGCCTGGAGGCATGACGTATGTTCATTCGTTC | 2 | 3.49822e-05 |
| AAGCCTATGTTTACGTACATATATATTGGTGTGCGCGTAC | 1 | 1.74911e-05 |
| AAGCCTGGACCGATCGGGGGGTAAATAGATGGTGCAGGGT | 1 | 1.74911e-05 |
| AAGCCTGGGAATGTTCGGTTGTGATAGATCAGAGAGGTTC | 1 | 1.74911e-05 |
| AAGCCTTCCGAACGGTCGTACTTGACGCTGGGTCAATAAG | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.