These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTAGGGCGGGTCAGGAACGGAGGGGATGTTGTCTGGAG | 1 | 1.74911e-05 |
| AAGTAGGGTCCAAATGTGTGAGGACAGGACAAGGTATCCA | 1 | 1.74911e-05 |
| AAGTAGGTTAAAGCGTGTTCAGTCTGGTGCTTGGTTGAAG | 1 | 1.74911e-05 |
| AAGTAGTCGTTGGGGAGGGGTAACCATCATGTAGGTTTAT | 1 | 1.74911e-05 |
| AAGTAGTGAACTGCTTGCGCTAAGTGACAACGCGAGGGTG | 1 | 1.74911e-05 |
| AAGTAGTGTAGACTGCCAGTGATGGTAGGAACGTGTGTTC | 1 | 1.74911e-05 |
| AAGTAGTTCGGCCGGATGGGGGTTGTCGCTCTTTGTTATT | 1 | 1.74911e-05 |
| AAGTATAAGGCCGTGTCAGAGCGAGCTGTATGTGTGGGCA | 1 | 1.74911e-05 |
| AAGTATATGTTTCGATGCAATACAAAGGCATGTGAAACAG | 1 | 1.74911e-05 |
| AAGTATCCGATAGGCTGCACCGGATTTGAATACTGTGATG | 1 | 1.74911e-05 |
| AAGTATGAAGATCTGTATGTTGTACTACCCGACGCGGTCA | 1 | 1.74911e-05 |
| AAGTATGATTGTTCTGCGTTAATACATGCTGTTCTGAACA | 1 | 1.74911e-05 |
| AAGTATGCAAATTCGGCTGTTTCCTTGGGCGGCGGCGTCA | 1 | 1.74911e-05 |
| AAGTATGCAACTATTACTTACAGAGTGTGGGTCGGGTTCA | 2 | 3.49822e-05 |
| AAGTATGCTTGAGGTTAAGGTTAAAGGACTCTCGGCTGCG | 1 | 1.74911e-05 |
| AAGTATGGCGTGAGCGTTGTCAGTGACCTTCGCACCATGC | 1 | 1.74911e-05 |
| AAGTATGGTCACTAGGGCTATTGAAGTTCTCAGGATCGAG | 1 | 1.74911e-05 |
| AAGTATGTCCGTGAAGTATTTGACCTGTGTCATTCCTCAG | 1 | 1.74911e-05 |
| AAGTATGTCGTACCGAAGCTGTACAGATTGCCAAGAGTTA | 1 | 1.74911e-05 |
| AAGTATGTGTGTGTACTTCCGACTATACGCGAGTGCCCCA | 1 | 1.74911e-05 |
| AAGTATGTTGTAGAGGAAGGTCGCGTGCACGCGGCAAACG | 1 | 1.74911e-05 |
| AAGTATTCGGTCTGTATGTGTCTCCTCTGATAGAGAACTT | 1 | 1.74911e-05 |
| AAGTATTCTCTTGCGCATGTCTAGGGTGGTACGGGCGCGG | 1 | 1.74911e-05 |
| AAGTATTGCGGATGCATGCAATTGGCGTGTGGGTATGAAA | 1 | 1.74911e-05 |
| AAGTATTGGAAGTTTCCATTGAGTTGCTCAACGGCTCCAT | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.