These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATATCATGGCCCGCGAGCTTGCTCTAGGGCGCGCTTGAG | 1 | 1.74911e-05 |
| AATATCCACAAGAGAAACATGACGTGATTAGAGCGGAGAT | 1 | 1.74911e-05 |
| AATATCCAGCCTCGTAGCCAGTGGACGTGGAGGCTGAGCA | 1 | 1.74911e-05 |
| AATATCGTAGGTACATAACATAGGGATACAGGTTTTCATA | 1 | 1.74911e-05 |
| AATATCGTCAAATTGGCGTGGTGCGATATTTATGTTGCGG | 1 | 1.74911e-05 |
| AATATCGTTCGTTAATGTATGTATGCGGGGACACCTTGTG | 1 | 1.74911e-05 |
| AATATCTAGATTTATCATCGTATCATTCCCGCTTGACGGG | 1 | 1.74911e-05 |
| AATATCTTACCGCTATCGGATGACCTGGAGACGATATGTG | 1 | 1.74911e-05 |
| AATATCTTATTGCCGTTGAAAGCGAAAATAACTCGAAGGT | 1 | 1.74911e-05 |
| AATATGAATAAATGAACGCGGTGTATAGATATCCTGCTTT | 1 | 1.74911e-05 |
| AATATGAATCATGTGGTGATAATGTCAGACTCCATGTACA | 1 | 1.74911e-05 |
| AATATGACATGCGTGTGCACTGCTCAGAGCGCCGTGGTGA | 1 | 1.74911e-05 |
| AATATGACGTACGGTTCTAGTGCTAACGTGTTAAGCCAGG | 1 | 1.74911e-05 |
| AATATGCACGTGCTGTTGGGACAGGTGAATACCGGGAGGC | 1 | 1.74911e-05 |
| AATATGCCGCCGGATGACTACGGGGAGTCGCGTGGGACGG | 1 | 1.74911e-05 |
| AATATGCGGGATGCCAGAGGAGGCGGCTCGCTCGCAGCTG | 1 | 1.74911e-05 |
| AATATGGACTGTTGGCGAGGAGTGGCATGGAGCTGCCGGC | 1 | 1.74911e-05 |
| AATATGGCTCGAGTGGTCATGAGGGCAACATTAGTTCGTT | 1 | 1.74911e-05 |
| AATATGGGCCCATTTCACAGGTATGTGAGCGATGTTATGT | 1 | 1.74911e-05 |
| AATATGGTCCGTTACGTTGACCTCAATTCTTGCCATGTAA | 1 | 1.74911e-05 |
| AATATGGTGGATTGCGTGTGCGTCGGTAAGTCTTGTGGGC | 1 | 1.74911e-05 |
| AATATGTCATGCGTGTTCGGTGGCTGAAGTATGTGATTGT | 1 | 1.74911e-05 |
| AATATGTCTCTGGTGTCTGAATGTGAACGTGTGCGTTCTG | 1 | 1.74911e-05 |
| AATATGTGACACATGAGACCGTGAGTTAGTAGTTATATAG | 1 | 1.74911e-05 |
| AATATGTGAGCTTGTATGGGGGCACATCTCATAGCATCGC | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.