These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAAGTGTTGTGACGATTTGCGGTCTGTGTTGGTGTGAAG | 1 | 1.74911e-05 |
| ACAAGTTGTAGGCAGTCATGGAAAGGACGGTTATAGGTGG | 1 | 1.74911e-05 |
| ACAAGTTTACACAGGGTCAATGATAAAGAGCTGTTTGGCG | 1 | 1.74911e-05 |
| ACAAGTTTTTCTCAGGTATGCGCGTTTTCCGCGTTGGTTC | 1 | 1.74911e-05 |
| ACAATAAGGGGGCCTCGCCTGCGACTATCGCATGACTCAT | 1 | 1.74911e-05 |
| ACAATAGACCTCAGGTGATTAGGATGAGGTGGCTGTAGCT | 1 | 1.74911e-05 |
| ACAATATACTACCTGATTGGGCTAGCCGCTAGGTCAGTTA | 1 | 1.74911e-05 |
| ACAATATCGGGTGCCTGCAGGCATGTGGGGCACAGTACGG | 1 | 1.74911e-05 |
| ACAATCAAGGTCGTATGTAGCACGGAAGGCTAGGCGCTAG | 1 | 1.74911e-05 |
| ACAATCATAGATCATGCCGCAGTTCTGGTGACGGTGTTTA | 1 | 1.74911e-05 |
| ACAATCCAGTTCTCGGGGGACTAGGAATGTTATTATGAAA | 1 | 1.74911e-05 |
| ACAATCGCACGTGAAGGGAGTGGAGGACAGCTCATGCGTG | 1 | 1.74911e-05 |
| ACAATCGCCACACGCCCGTGTATATGTGTTAGCGAAGTGC | 1 | 1.74911e-05 |
| ACAATCGTGCAGCATATACGCGCGGAAGCATGACAGTACG | 2 | 3.49822e-05 |
| ACAATCTTACATCGTTCACTGCAGCATGCTAAAAGTCTCG | 1 | 1.74911e-05 |
| ACAATGATGGCTGAGTTTTATACGCGCGTGGGTGGCATGA | 1 | 1.74911e-05 |
| ACAATGATGTAAAATGTTTGGTAGTTGACGGGCGGTGGGC | 1 | 1.74911e-05 |
| ACAATGATGTCAAGGAGCGGGGAGCGACACATGTATATGG | 1 | 1.74911e-05 |
| ACAATGATTAGTATGAAGCAAATCTTTGCGACTTACGAAT | 1 | 1.74911e-05 |
| ACAATGCGAGGTGGGCATCGTGTGGAATAGCGGTACAAGG | 1 | 1.74911e-05 |
| ACAATGGAACCGCGCTTCAATGTAGGCCTGAGAGGATGGC | 1 | 1.74911e-05 |
| ACAATGGACTGCTGGGTTCGCTCAAATGGACAAGCCCTCG | 1 | 1.74911e-05 |
| ACAATGGCAATAGGCCTGAGTGCAAGTGATGGCCAAGCTG | 1 | 1.74911e-05 |
| ACAATGGGCTGAGGGCCGAGCACGTGTGGTGGTATGATGG | 1 | 1.74911e-05 |
| ACAATGTTAGTTACCGGTAAGCACTGGATGATGGTGAGAT | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.