These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAGTGTCGATGGACTGCCGGGAATGCAGGCCGTTTTGCA | 1 | 1.74911e-05 |
| ACAGTGTTATGCCTAAGCACCTGTACATGTTGTTCCTTAT | 1 | 1.74911e-05 |
| ACAGTGTTGCACCATCTTCGCCATAGGTTCTCATAGAGTG | 1 | 1.74911e-05 |
| ACAGTTAATCATGAGAGTCCACAGGCAATGTGATTATTGC | 1 | 1.74911e-05 |
| ACAGTTAATGAGCCGCACCGTAAAGCTCAGGATGTCCATA | 1 | 1.74911e-05 |
| ACAGTTACAGTCAAGACAATCTTCGATCGTGCGTGGCCAG | 1 | 1.74911e-05 |
| ACAGTTATTAGGGTTGGAATTAGTTTCTCTTTCCTTCCCG | 1 | 1.74911e-05 |
| ACAGTTCATGCTTTCGCCTAGGAACTGTCGGTGTATGGAG | 1 | 1.74911e-05 |
| ACAGTTGAATGCCCATGGTGACCGCCTGCCCATGTTGTGG | 1 | 1.74911e-05 |
| ACAGTTGAGGTACGGGGTTGGAAGAACTTTGGGCGCGTGT | 1 | 1.74911e-05 |
| ACAGTTGGGGCGCGCCTACGGGCACGGTTTGGATGCGACT | 1 | 1.74911e-05 |
| ACAGTTGGTTGTCACGTTAAGGTACGATTTGTGTGGCTTG | 1 | 1.74911e-05 |
| ACAGTTGTAGAGATGATAGGCTTACATGTCTGTTACTCAG | 1 | 1.74911e-05 |
| ACAGTTGTGGAAGTGCTGAGAGTACAGTATTTCGTGTTAA | 1 | 1.74911e-05 |
| ACAGTTGTTGTATGGAGATTAGACGGCCGGGCTCGACTTG | 1 | 1.74911e-05 |
| ACAGTTTAACATACGGTTTTTTTGCATGTTCAGGCCGCCA | 1 | 1.74911e-05 |
| ACAGTTTACATTTTAGGAGTACAGGTGTGGAGTGGATTCC | 1 | 1.74911e-05 |
| ACAGTTTAGAGGGTCGTGCGTTCATTGGCTTTGAGGTGAA | 1 | 1.74911e-05 |
| ACAGTTTATGAACCTAGACTAGTTTATTAATCTCAGTAGA | 1 | 1.74911e-05 |
| ACAGTTTATTGTCACCACACGGCGTAGAAAGGTAGATGGT | 1 | 1.74911e-05 |
| ACAGTTTGCGTGTTGCCACCGAGACCTGGGCATGTTTAGG | 1 | 1.74911e-05 |
| ACAGTTTGGCATGATGGCCTTTCTGCCTCCGTGGCTCATG | 1 | 1.74911e-05 |
| ACAGTTTTATACACGCAACGGGCTTGCTCGGGTGGGGGCA | 1 | 1.74911e-05 |
| ACAGTTTTGAGAAGAATGCGTCGGGAAGTTATCAGTGGCG | 1 | 1.74911e-05 |
| ACATAAAAAGAAGGCGTAAGTGCGGCTGAGTTATCGTGTT | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.