These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACATCTACTCTTATTGCATTTAGTTATTTCTTTTAATAGA | 1 | 1.74911e-05 |
| ACATCTATTTTGCGTACAATAATAAAGGGAGATAACGCAG | 1 | 1.74911e-05 |
| ACATCTCAACACAGGCAGAACGCGTGTGGCAGGCGTGGTC | 1 | 1.74911e-05 |
| ACATCTCCTCGAGTATTGTTCAAGCGCACCCGGCGAGGAA | 1 | 1.74911e-05 |
| ACATCTGATCACGGCCACGAATAACCCATGGGTCGGGTAT | 1 | 1.74911e-05 |
| ACATCTTCTAGGCATTGGATTCGTATGTCCAGTCGTATTC | 1 | 1.74911e-05 |
| ACATGAACAACGTAGGTAGATGTTACATGAGGCGGGAACG | 1 | 1.74911e-05 |
| ACATGAATCGTGGCCATATGGGCAAGGTTGGGTACCAGGT | 1 | 1.74911e-05 |
| ACATGACATCATGTTAGTCTCGAATTGGGGCTAGTCCGTA | 1 | 1.74911e-05 |
| ACATGACATTCACATGTTGTGTACCAAAGGTGGCTTTTAT | 1 | 1.74911e-05 |
| ACATGACTATTGTAGCAGAGCTCGTCCGGGCAGTCGAAGA | 1 | 1.74911e-05 |
| ACATGAGAGGCATGTAGGGGCTAGAGCACAAATGTTTTAG | 1 | 1.74911e-05 |
| ACATGAGATGTCGTTGGTGGTACCATATGAGATGAGATGA | 1 | 1.74911e-05 |
| ACATGAGGGTGCTGAACCCGTGCATGCTTGACGATGTACT | 1 | 1.74911e-05 |
| ACATGATACCAGCCGTTAATGTGCAAACACCAATATCGGA | 1 | 1.74911e-05 |
| ACATGATACGTAACACTATATGGCGAGGCAACTTGGGTCA | 1 | 1.74911e-05 |
| ACATGATCCGGCAGTTACCTTTAGATGGCTCATTCTACAG | 1 | 1.74911e-05 |
| ACATGATCTGAGATGAGTCATGGGTTTTGACTTCGACGAA | 1 | 1.74911e-05 |
| ACATGATGCATTACAGGTAGACATAATTGGACATTCGCAG | 1 | 1.74911e-05 |
| ACATGATGGGATTTATACCTTGCGCATGACACGGGTTCTA | 1 | 1.74911e-05 |
| ACATGATGGTGTTGTCAGTACGCACTGCATGCTAAGTGTG | 1 | 1.74911e-05 |
| ACATGATGTCAGGATCCCGCAGACGCCAGAGCGATGCTCG | 1 | 1.74911e-05 |
| ACATGATTTTTTCGAATTTATGGAGAGGGTTAACGTTTTC | 1 | 1.74911e-05 |
| ACATGCAAACGAGCACACACTGGCGCCGCGGCGCAGGTGG | 1 | 1.74911e-05 |
| ACATGCAAAGGATGATACTTAAGACTGGCTTCCTCGCGAT | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.