These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACATGGAGATCAATGGTTGGTACCATATGTTGTGGTTTAT | 1 | 1.74911e-05 |
| ACATGGAGCAAGACCCACCCGCGTGTATATGTGTGTAATT | 1 | 1.74911e-05 |
| ACATGGAGGCATTAGCACTCTTTTGGTGTGCATTCCGGTG | 1 | 1.74911e-05 |
| ACATGGAGTCGTCGCGGACATGCGGTCGTGGTCAAGGTCA | 1 | 1.74911e-05 |
| ACATGGATACATGGAGTCAGAACGAATTTATAAGGCTTGT | 1 | 1.74911e-05 |
| ACATGGATGCGATAGTCTGTGTTGCGATGTATGGACCTAT | 1 | 1.74911e-05 |
| ACATGGATGCGGAATTTCAAATATTCGTTCCTCGACTTTA | 1 | 1.74911e-05 |
| ACATGGATGTCCTATTGGTTATCAATACTTCTTACATATA | 1 | 1.74911e-05 |
| ACATGGATGTGAATTCCACGCGTGTGCCCTGTGAAAAAAG | 1 | 1.74911e-05 |
| ACATGGATTATCCTTTGATACATATTACAAGAATCCATCG | 1 | 1.74911e-05 |
| ACATGGATTCTTGTCGATGAGGGGAAAAGCACTTCTTAGG | 2 | 3.49822e-05 |
| ACATGGCAAGGTATCGCGGGTGTTGGGACGTCGTTGGGAT | 1 | 1.74911e-05 |
| ACATGGCCTGTCGGCGTGGAAGAAGACTTGCCGTGTGTTG | 1 | 1.74911e-05 |
| ACATGGCGACTACTGAGTGGTCAGTGGTATGATACGCACC | 1 | 1.74911e-05 |
| ACATGGCGGGGTCGTATGATATCACAAGCGTGGCATCGTG | 1 | 1.74911e-05 |
| ACATGGCGTTTGAGGCTCAGTCAAGCCGCGGGACTTTTGA | 1 | 1.74911e-05 |
| ACATGGCTCTATATATGAACAGTGTGTTATCATGGTTTCA | 1 | 1.74911e-05 |
| ACATGGGATCGGTTCCTATTGAAGGCGTGCTGAATAAACA | 1 | 1.74911e-05 |
| ACATGGGATTGGTTGCAGTATATCAGCATGGGTTTACCAT | 1 | 1.74911e-05 |
| ACATGGGCGGGAGAAGCGGCTCTATAGCTGGCGGACCAGG | 1 | 1.74911e-05 |
| ACATGGGGACATAATCGTAGTTCAGATTACACTTACGTGT | 1 | 1.74911e-05 |
| ACATGGGGATCGTAAGCGAATTTCGGCTCTGTAAGATTTT | 1 | 1.74911e-05 |
| ACATGGGTAGACACGTGTGATCGTCTGATTATGAGTTACA | 1 | 1.74911e-05 |
| ACATGGGTGTCACAGTGTGAGGGTTCATGACGGTTGAGTG | 1 | 1.74911e-05 |
| ACATGGGTGTGCCGTGAGGATCGGGACTTTCTGGAGTGTC | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.