These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACGAGCCGTCGTTTCAGGCGGAGTGGGCATGTGCATAGTT | 1 | 1.74911e-05 |
| ACGAGCGCATGGCGGGGCCATTGATGTGCGACAGGGGCGT | 1 | 1.74911e-05 |
| ACGAGCGTGCGGTCGAGGGTATGTGTGTGGGACGTTTTCC | 1 | 1.74911e-05 |
| ACGAGCTCCGTCTCCCAGCAACTGGTTCGAGAATAGTGCA | 1 | 1.74911e-05 |
| ACGAGGAATGCATAGTCACGCTTAGACGGTGCGGGGTTTC | 1 | 1.74911e-05 |
| ACGAGGACTGATTGTGTATAATAACCGTTGGTGACGGGCG | 1 | 1.74911e-05 |
| ACGAGGCATTGGTAATGGGGCGATCGAGGCGGCGTGGTGT | 1 | 1.74911e-05 |
| ACGAGGCCGCTCAACAGGCGCAGTAATGTGCAATGCAGGA | 1 | 1.74911e-05 |
| ACGAGGCCTCGGTCCAGGTTCACGGGGGGGGCCTGTCGCG | 1 | 1.74911e-05 |
| ACGAGGCGCTTAAGAAAAACCAGCATCGGCATATATGTGC | 1 | 1.74911e-05 |
| ACGAGGCTCGCCCTGATCATTCGTATAGGCCTGTCTAGTG | 1 | 1.74911e-05 |
| ACGAGGCTCGTATGAAGCGTTTTAGATGATCGGTCGGCGT | 2 | 3.49822e-05 |
| ACGAGGGCAGGGAAAAGTATAATAGTGTTTATCTGTAATG | 1 | 1.74911e-05 |
| ACGAGGGCTTTAGTCACTCGCTGATAGTCGTGGACACAAT | 1 | 1.74911e-05 |
| ACGAGGGTCCGTTTATATCTGGTCTGCATTTTCGGCCGCG | 1 | 1.74911e-05 |
| ACGAGGTAGGGTTCGCGGTACAGGACACAGTGGTCAGAAA | 1 | 1.74911e-05 |
| ACGAGGTATTATTACAGCTGTACATAGGTCGTACTAGCCA | 1 | 1.74911e-05 |
| ACGAGGTTACCGCGTATTTCCGGTGTATGCGTCTGCATAC | 1 | 1.74911e-05 |
| ACGAGGTTTAGATGGTCGCGTGAGCGATCGTGGCGCGTGT | 1 | 1.74911e-05 |
| ACGAGTATTGTTCTGGGACTATTGGTGTGTTGGGCCGTAA | 1 | 1.74911e-05 |
| ACGAGTCCCGGTGATACGAGCGGTGGAGGAGCGTGTAGTA | 1 | 1.74911e-05 |
| ACGAGTGCATGTCACGGGGTTAGTGTGGACTATGTGGATA | 1 | 1.74911e-05 |
| ACGAGTGGGGTGAATGGCTTCCACTGGGTTGAGTAGGGCA | 1 | 1.74911e-05 |
| ACGAGTTCCGTTGTTCAGAGGTCCTGCCACTCATTGAGGA | 1 | 1.74911e-05 |
| ACGAGTTCGTGTGACACTGCAACCTATCGGGAGCGGTAAT | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.