These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACGATGTGAAAGGCGGCGATTGGGTCAAACCCGACGCCAC | 1 | 1.74911e-05 |
| ACGATGTGATTATGTGCATGTACTTGGCTCGAGGTGGCGC | 1 | 1.74911e-05 |
| ACGATGTGCTTAAACATGTTGCCTGAATCTTAGGTAACGC | 1 | 1.74911e-05 |
| ACGATGTTGTATAGGTGGCAATGTTGATCGATCTCGAGGA | 1 | 1.74911e-05 |
| ACGATTAAATAATGATTGACGAGTTAAGCAGGATGGCGCC | 1 | 1.74911e-05 |
| ACGATTAAGGGGGATGATTTATTTATGTTACCTTGCGAGG | 1 | 1.74911e-05 |
| ACGATTATGGCATCAAAATCCCTGCTTGTGCATTAGTCAT | 1 | 1.74911e-05 |
| ACGATTCTTGAGTCATGCGATTGATGGTATGTCGTTGACG | 1 | 1.74911e-05 |
| ACGATTGAGCGGTCCATGTTTCGCGCTCAGCCTGGATCAA | 1 | 1.74911e-05 |
| ACGATTGAGGGCGAGGAGGGGACGCGAGATGCTGAGGTCC | 1 | 1.74911e-05 |
| ACGATTGGATTGCAGGAGTTTGGCATACGTGGGCTTCTCG | 1 | 1.74911e-05 |
| ACGATTGGTGTGCCGGCAAAGTTCATCACTGAGATGGGAG | 1 | 1.74911e-05 |
| ACGATTTAAGCTAGGTGTCACATGTGTGTAGCGTGTGGCA | 1 | 1.74911e-05 |
| ACGCAAAAGGGAGGTGTGAGTACCGGTTGGACGCTTAAAC | 1 | 1.74911e-05 |
| ACGCAAACAGGAGTATAGCTTTTTGCCCCATGCTCTAGCA | 1 | 1.74911e-05 |
| ACGCAAAGTGAGCTCACATTTAATACACTAGAGGGTAGGC | 1 | 1.74911e-05 |
| ACGCAAATGCTGGGCTGTATGTAAGTACGGACCTGAAGGT | 1 | 1.74911e-05 |
| ACGCAACGGATATGGAGTACTACGAGTCGGTCGACATCAA | 1 | 1.74911e-05 |
| ACGCAAGGATAGCAAAGGGCTACACTGTAGCTGAAGTATG | 1 | 1.74911e-05 |
| ACGCAAGGCTTTCTGAGGTTCCCGAGAATTTAAAGCGATT | 1 | 1.74911e-05 |
| ACGCAAGTGATTTATCGGATCTGGGAGGGATGAGGGTGGT | 1 | 1.74911e-05 |
| ACGCAATTCGTGAACGTTCTGGTGGAGTGACGGCTGGCCA | 1 | 1.74911e-05 |
| ACGCACAGACTGCGCCGGCAAGTGTAGATTTGGTGTTTCA | 1 | 1.74911e-05 |
| ACGCACCTAGAGCTTGACAAACTTGACTGCGGGCCATTGA | 1 | 1.74911e-05 |
| ACGCACCTGCGAGTAGGGTAGTTTGCTGGGTGTCATTACG | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.