These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACGCGTGTGACAGGGGGTGCGGGGCACGCTAGGGGCGCAT | 1 | 1.74911e-05 |
| ACGCGTGTTACCAGTGAAAGGTGGGGGGTGATCGAGCACG | 1 | 1.74911e-05 |
| ACGCGTGTTATGCGTTCGAGCAGTGGGGTTGGCGTTGTGG | 1 | 1.74911e-05 |
| ACGCGTTGAATGTGATTACCCCTACGCTTATATGTAACTG | 1 | 1.74911e-05 |
| ACGCGTTGCCCATGCGCGACGCGTGTTGGCTCGATTGGCA | 1 | 1.74911e-05 |
| ACGCGTTGGGGGACTACCGCGGGGTGATTACACGGAGCTT | 1 | 1.74911e-05 |
| ACGCGTTTACTACCAGTGTGCTTGGCGTGGCAGTCTTAGT | 1 | 1.74911e-05 |
| ACGCGTTTCAGTAGAATGCAGTGACGGGTCGTTGCTGAGG | 1 | 1.74911e-05 |
| ACGCTAAAAGGTTGACGCAAGTCGGGGTGAACATGGATGG | 1 | 1.74911e-05 |
| ACGCTAAATTTATTCGTTGATTACGAGGAAGGGTCAACCG | 1 | 1.74911e-05 |
| ACGCTAATTGGTACCTATGCCTGGTTCAAGCGCAAATAAA | 1 | 1.74911e-05 |
| ACGCTACAAAATGTTTGTTTCAAACGGCATACAATGTCTA | 1 | 1.74911e-05 |
| ACGCTACGAAGTGTGCCTCAAATTGGTGACCTTCCATAAG | 1 | 1.74911e-05 |
| ACGCTACGTGGCCTTGACAAGGACGGGATAGGGGGAACTG | 1 | 1.74911e-05 |
| ACGCTAGAATGAATCATGAGGGCCCAGATTGGTCGTCACA | 1 | 1.74911e-05 |
| ACGCTAGCAGCAAGCGGGGACGCGAATACATCTCTAGCCG | 1 | 1.74911e-05 |
| ACGCTAGGTTGGAGGTGGATTGTCGAAGGCTTGCAATCGG | 1 | 1.74911e-05 |
| ACGCTATACTAGCACCTTCGCCAAGCTGGAGGCTGGTAGC | 1 | 1.74911e-05 |
| ACGCTATATATGGAACTATCGTGCGTACGGATGTGCTTTG | 1 | 1.74911e-05 |
| ACGCTATGTCACGCTTTAGAGCTGATGGTTAACGTTCTGC | 2 | 3.49822e-05 |
| ACGCTATTCCGTGTAAATCAGAGGTTAGTCGACTGGCGTC | 1 | 1.74911e-05 |
| ACGCTATTGCTTAGACCCGGCGCGCGCGCGTTTACGGGCA | 1 | 1.74911e-05 |
| ACGCTCACGGCGTGGGCAGGTAACTTTGCATGTAACGGGT | 1 | 1.74911e-05 |
| ACGCTCATCTACATGATCGGGAGGAGGCGAAGATGGAGTA | 1 | 1.74911e-05 |
| ACGCTCATTCAAGGATCATGTTTCCGCTTGTGGGTGGCTG | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.