These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACGGGATCGGGCTGCGGTCCTAGCTGATCTCATGAGCGTG | 2 | 3.49822e-05 |
| ACGGGATGTATGTTGCGAGGCGGGGGTCCGCTGGCCGGTG | 1 | 1.74911e-05 |
| ACGGGATTAGCTAAAGTTGGCACAGTGCAGCGCTTCATCC | 1 | 1.74911e-05 |
| ACGGGCAACTATTCTAGCAATCGGCTGTAGGAGGGAGGTC | 1 | 1.74911e-05 |
| ACGGGCAGAGTACTCGATCATCCTATCGTGATGCACACGG | 1 | 1.74911e-05 |
| ACGGGCAGGTAAGCGCGAGAGGCAAGGCCGTGGAGTCGTT | 1 | 1.74911e-05 |
| ACGGGCATCTTGCCGGGGCTGCGGTGGTATGGTCCCAACA | 1 | 1.74911e-05 |
| ACGGGCGACACGCGAGATGGCCTGGAGATGTTCATTGCGC | 1 | 1.74911e-05 |
| ACGGGCGACGGCGCCGCTATGGCTATAAGTGTATTTGCGT | 1 | 1.74911e-05 |
| ACGGGCGGTCCAAGTCCAAGGCTGGTGTGTACGAGATCAG | 1 | 1.74911e-05 |
| ACGGGCTCAGCACTGGTGCTTACGTTCTATGACCATTATG | 1 | 1.74911e-05 |
| ACGGGCTCATGTGCCCACTTTATGGTCACCTGGTCAAGTG | 1 | 1.74911e-05 |
| ACGGGCTGGGAGTTGCGGGTCCGCTTTTGGACGCCGGGGA | 1 | 1.74911e-05 |
| ACGGGCTGGGCTTTGGAGACCGTGATATGGTAGTTCGCGT | 1 | 1.74911e-05 |
| ACGGGCTTGGGGCGGCGACTATGGACGTTGTGAAGGTGGT | 1 | 1.74911e-05 |
| ACGGGCTTTGGTGGTGTAAGGCCGATAGGATGTCAGTTGG | 2 | 3.49822e-05 |
| ACGGGGAAGGGAAGTTGCGCTCATCTCGCTGTTGGAAGAC | 1 | 1.74911e-05 |
| ACGGGGAATCGGACCGGGCGTTCGCGTTGCCATGAATGCA | 1 | 1.74911e-05 |
| ACGGGGACAGGGGAGGCGGGCTTTTGGCGGCGTGAAAGTC | 1 | 1.74911e-05 |
| ACGGGGAGAAGTGGGCTGGCATCGGAGAGGAAGGTGGTCG | 1 | 1.74911e-05 |
| ACGGGGATCTGGCGGTTAACCGCCTTGCTTTCGAGTGAGA | 1 | 1.74911e-05 |
| ACGGGGATGGTTGTTACTATGCCTAATTATGTGTATGTTG | 1 | 1.74911e-05 |
| ACGGGGATGTACACGGCTCTGGACTTAGTCTATGGTAACA | 1 | 1.74911e-05 |
| ACGGGGCAAACGCCCTGTATGTGGGGGCAAGGAATAGGCA | 1 | 1.74911e-05 |
| ACGGGGCCGCGATTCCGGTCGATGTGGTGAGGAAGTATCA | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.