These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016769
NACC2_TG40NTGTGTTYWCB3
- Reads
- 299,495
- Distinct strings in file
- 293,291
- File size
- 3.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016769
- Sample:
- SAMEA12312954
- SHA-256
- 39bf66ba118816d75b150c326a92da72338392eca6a887e0358c20c28810b7c4
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGCGGCCCGTTCGGTTACCACACATTTTAGCCTAACGG | 1 | 3.33895e-06 |
| AAAGCGGCGCACAAGAGACATTCTTCGCGACTTAAGGGCC | 1 | 3.33895e-06 |
| AAAGCGGCTCGATCATCGTGGCGTACGCAACTAAATGCTA | 1 | 3.33895e-06 |
| AAAGCGGCTGTTGAGAGTGTGAACCTGGGCTTCGTTAGGT | 1 | 3.33895e-06 |
| AAAGCGGTCTCCTTGCCTTCCAGTTATGCTTACCTCATGA | 1 | 3.33895e-06 |
| AAAGCGGTCTGTGCATCTTGGGTTTAATCATCAGCGACGC | 1 | 3.33895e-06 |
| AAAGCGGTGACGTATTGCCGCGCCTTGAGACGCCATACGA | 1 | 3.33895e-06 |
| AAAGCGGTGTTGTAGGATCGTTATACCCAGTAGTGCTCAC | 1 | 3.33895e-06 |
| AAAGCGGTTAGACGTGGGCGTAATGGGCCATGTCGTGAGT | 2 | 6.67791e-06 |
| AAAGCGGTTAGGGGTATTCGTTCTGTTCTTAAATCCCTAC | 1 | 3.33895e-06 |
| AAAGCGGTTGTTTGTGGTGGTGTTGTCGGCATACCGCTGG | 1 | 3.33895e-06 |
| AAAGCGGTTTGGGAGGTCGTATGTAGTGGCTACTATGACT | 1 | 3.33895e-06 |
| AAAGCGTAACCAAAATTTCCATTGTGTTATGGCACATCAG | 1 | 3.33895e-06 |
| AAAGCGTACGGACAGGTTACGGATTAAGTCCAGCTTTATT | 1 | 3.33895e-06 |
| AAAGCGTCAAATGTATCATTGAGGACTCGTGGGGCACTGC | 1 | 3.33895e-06 |
| AAAGCGTCAGGTATGGCTTCGTCGAGCCATCGGCTGCCAA | 1 | 3.33895e-06 |
| AAAGCGTCGCGTGATGACGAGGGTTCTCATACATTTACTT | 1 | 3.33895e-06 |
| AAAGCGTCTTATGGTTTCAGACTATGATCTTAGTGTTATG | 1 | 3.33895e-06 |
| AAAGCGTGAACTTGCTGTTGGGTTAGCATTTATGGGTACC | 1 | 3.33895e-06 |
| AAAGCGTGAGGAGAGCCTACTATTGTCATATGCTCTATAA | 1 | 3.33895e-06 |
| AAAGCGTGCAATGAGACGCCAAGATGATACGTTTTTCGTC | 1 | 3.33895e-06 |
| AAAGCGTGCATGATCGAACGCAATTTTAGATTGATTAAGA | 1 | 3.33895e-06 |
| AAAGCGTGTTCCGTCACACCGGCGGATCAAGTTCTCGTAC | 1 | 3.33895e-06 |
| AAAGCGTTGCTTTACCTTTATTTGCGCACGTCTATCAATG | 1 | 3.33895e-06 |
| AAAGCGTTTCCTGACTCTACATAGGGGATAGATGGTTAGT | 1 | 3.33895e-06 |
Read fractions use all reads in this source file as the denominator.