These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016769
NACC2_TG40NTGTGTTYWCB3
- Reads
- 299,495
- Distinct strings in file
- 293,291
- File size
- 3.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016769
- Sample:
- SAMEA12312954
- SHA-256
- 39bf66ba118816d75b150c326a92da72338392eca6a887e0358c20c28810b7c4
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGGTCGCCAAGCCCCTCCGTTCTGACCCCCGTTTTTGC | 1 | 3.33895e-06 |
| AAAGGTCGGTAATAACGATTTTTCATGTTTCAAGAGTGGC | 1 | 3.33895e-06 |
| AAAGGTCGTATGACCGCGACCCCGTAGTAGTAAAACTGCT | 1 | 3.33895e-06 |
| AAAGGTCGTCCCTTCGCCGGCAAAGATTCTAGCGACAGAG | 1 | 3.33895e-06 |
| AAAGGTCGTGATTGTAAATCTGGAGAGCTAAATAAACTGT | 1 | 3.33895e-06 |
| AAAGGTCGTGCAGCGATTGATTTGCGTTACTTAGCTCACC | 1 | 3.33895e-06 |
| AAAGGTCTCGTAGCGCCAACGGATATTCTCCGGGACCGAA | 1 | 3.33895e-06 |
| AAAGGTCTGGGAGTGGGTATCCATATGTCCTTGCAACTCA | 1 | 3.33895e-06 |
| AAAGGTCTGTAACACATATTGCCATGCCCAATGCATGCCA | 1 | 3.33895e-06 |
| AAAGGTCTTAATTCAAGGTGAGCGGCCGATGTGTTGGTCT | 1 | 3.33895e-06 |
| AAAGGTCTTATTCGAACCGCTCAAATTAAATACGCTATTG | 1 | 3.33895e-06 |
| AAAGGTCTTCGGTATACCAGCGTGCCATCTACATTACTCA | 1 | 3.33895e-06 |
| AAAGGTCTTGGCTGATTTTCCTTTGGCTTTCCCATGTTTT | 1 | 3.33895e-06 |
| AAAGGTCTTTTGTAGCATTTATGTACGATATTTCAGGGAG | 1 | 3.33895e-06 |
| AAAGGTGATTTTTATCCTAAATTATGCTGCTCTCATCTTT | 1 | 3.33895e-06 |
| AAAGGTGCACAACCGTATCTTAACGTGACTTATAGTCAGC | 1 | 3.33895e-06 |
| AAAGGTGCACACTGGTAAATGCGCAGACAGTTATGCACTT | 1 | 3.33895e-06 |
| AAAGGTGCATTGACCATCATTCTTATCTGCGTCACTACCC | 1 | 3.33895e-06 |
| AAAGGTGCCAGTGACGAAGGATCTAATCCGTGCCAGACTC | 1 | 3.33895e-06 |
| AAAGGTGCTAATTTTTCACAACTGTCGCAATTGTTTAATA | 1 | 3.33895e-06 |
| AAAGGTGCTACCCTTTTTGCATCTCTGTCTAATCTTTTCG | 1 | 3.33895e-06 |
| AAAGGTGCTCATCTTTTTCGAGTCCTTCCGCTATATCGTA | 1 | 3.33895e-06 |
| AAAGGTGCTCATGAAGATACCTGAGAACGGATGGATTACA | 1 | 3.33895e-06 |
| AAAGGTGGAATTTCCTAAGAATGCCTTTGTACCACTGTGA | 1 | 3.33895e-06 |
| AAAGGTGGACATAGGTAACCGTTTTACTACATATACGATT | 1 | 3.33895e-06 |
Read fractions use all reads in this source file as the denominator.