These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016769
NACC2_TG40NTGTGTTYWCB3
- Reads
- 299,495
- Distinct strings in file
- 293,291
- File size
- 3.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016769
- Sample:
- SAMEA12312954
- SHA-256
- 39bf66ba118816d75b150c326a92da72338392eca6a887e0358c20c28810b7c4
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAGTCCAACATCCAGTTGACGAATCATTTCAAGTTGAT | 1 | 3.33895e-06 |
| AAAAGTCCGTAAGTATTGATCATATGCTCCTTGAGATTTT | 1 | 3.33895e-06 |
| AAAAGTCCTTGTCTTAAGCTAGTTTGTATGCACCGTCTAA | 1 | 3.33895e-06 |
| AAAAGTCGGCGATATGATATTGCTGATCCTGCTGAACTTG | 1 | 3.33895e-06 |
| AAAAGTCGGGGCTGTAAGGTTCTACATGTCACATTTGACA | 3 | 1.00169e-05 |
| AAAAGTCTGGTAGCGTCCTTTTTGCATGCCGTGAGGGGTA | 1 | 3.33895e-06 |
| AAAAGTCTTGATGGCATGTGGCCTATGTTTGCGTTCCATA | 1 | 3.33895e-06 |
| AAAAGTGATGTCACAATGAAAATATATGTATTCTTTCAAC | 1 | 3.33895e-06 |
| AAAAGTGCAGGCGGACTATACGGAGTGACAGTGGTACCCG | 1 | 3.33895e-06 |
| AAAAGTGCCATGTTGTTTGATAACTCAGGCATGATTACTT | 1 | 3.33895e-06 |
| AAAAGTGCGTTGGTGTCGTTAAACTCCTGTGTTGTTGCGC | 1 | 3.33895e-06 |
| AAAAGTGCTTCATTCGTCTTAAGGCATCAGGGTGCCATCA | 1 | 3.33895e-06 |
| AAAAGTGGGACTAGCTGATGTTCTCCTCGTTTTGCTACAT | 1 | 3.33895e-06 |
| AAAAGTGTATGGTTAAAACCAAGGCAACGGACCCGGGATC | 1 | 3.33895e-06 |
| AAAAGTGTTAACGTACCAGTGAGGGTCTAGGGGAGGCTAC | 1 | 3.33895e-06 |
| AAAAGTTAAGTACTCTGTAGCCTGGAAGAAAGTACGGAGT | 1 | 3.33895e-06 |
| AAAAGTTACGTATTCTGCCTTACTTGTACATGGGGATACA | 1 | 3.33895e-06 |
| AAAAGTTATACTTAGTCCATAATTAGCCAGTGCGATCCAG | 2 | 6.67791e-06 |
| AAAAGTTATTCACGATGGGTATCGCGACCACCATTTCCCA | 1 | 3.33895e-06 |
| AAAAGTTCTTGTGCTCTTTATTCGCCTATTACCTGCTTCG | 1 | 3.33895e-06 |
| AAAAGTTGAGCGAAGAGTGCTTGCATCTGCTAAAACCGTC | 1 | 3.33895e-06 |
| AAAAGTTGAGGTTGACTTAAACTTGCGTTTCATACGTCAA | 1 | 3.33895e-06 |
| AAAAGTTGGGGTATGTCCATACACCCCCTTGGCAACGGCG | 1 | 3.33895e-06 |
| AAAAGTTGTCTGATGGGGGTGATGTACTAGATACTGTTGA | 1 | 3.33895e-06 |
| AAAAGTTTGATAGCTGCCATACATAGTACTGATCAGTGTC | 1 | 3.33895e-06 |
Read fractions use all reads in this source file as the denominator.