These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016770
NACC2_TG40NTGTGTTYWCB2
- Reads
- 259,882
- Distinct strings in file
- 254,658
- File size
- 3.2 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016770
- Sample:
- SAMEA12312955
- SHA-256
- 4b498375173af5c3ac4002109720de27c803503dfa69574b46cf4648b0e2ec62
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGTGTACGCTGCCTCGAGTTATCTCTAGTGGCATCGCG | 2 | 7.6958e-06 |
| AAAGTGTACTTAGTTCACGCCTAGCTCCCTCGAACAACGG | 2 | 7.6958e-06 |
| AAAGTGTATGTGCACTCTTCCCGTTGTCCCTCCGGCTGGG | 1 | 3.8479e-06 |
| AAAGTGTCAGTGAGAGGGCTATTAGCAAGGGGGATGGCCT | 1 | 3.8479e-06 |
| AAAGTGTCGAGCTTATGGCTTGTCCGATACGGTAATCTCC | 1 | 3.8479e-06 |
| AAAGTGTCGGTACATAAGGGGTGCTCAGGAATAATATAAC | 1 | 3.8479e-06 |
| AAAGTGTGCACTTTATGATTTACTGCCTAATTCCTTCCGC | 1 | 3.8479e-06 |
| AAAGTGTGTGTCAGCGTGCGGGTCTCTTTCCGCACCCGAT | 1 | 3.8479e-06 |
| AAAGTGTGTTTTGAACTGTAGTGTTCGTCATTAATTCGCT | 1 | 3.8479e-06 |
| AAAGTGTTATCATCGTCGAAGCCTTGTGTGCTCGTCCCCG | 1 | 3.8479e-06 |
| AAAGTGTTCATTTTAAATCTCCTTTTGGTTCTAGCGTTCA | 1 | 3.8479e-06 |
| AAAGTGTTGGAAAGAGTAATTGCTTGCTTCGGCTCCATAA | 1 | 3.8479e-06 |
| AAAGTGTTTAGTTGCTACAAAATTTTGAGTATCGTCAAGC | 1 | 3.8479e-06 |
| AAAGTTAAATTCCAACCTCACGGGGCAAGTTGTCACTTAA | 1 | 3.8479e-06 |
| AAAGTTAACAGTACATTTGCTACTCATTACTACTTCCGAC | 1 | 3.8479e-06 |
| AAAGTTAAGGCAACCCGCACCCTACTTTCTACTATTCAGC | 1 | 3.8479e-06 |
| AAAGTTAATACACAACTTGTTCGACTCGGGCCTGAGCACA | 1 | 3.8479e-06 |
| AAAGTTACACTCCTATGCCTTAGGTTTCCGATGGCGCCGA | 1 | 3.8479e-06 |
| AAAGTTACAGCCCCGACCATGGGCTGTTGTTAGAACTGAC | 1 | 3.8479e-06 |
| AAAGTTACCTACTATTGCGGGCCTCACCATCAGCCTCATT | 1 | 3.8479e-06 |
| AAAGTTACGTCCTTGAGGTGGTCATGCTATTTCGACCATA | 1 | 3.8479e-06 |
| AAAGTTACGTCTTTCTCGTTTGTGGTGGTTTGTTTGGCTC | 1 | 3.8479e-06 |
| AAAGTTAGATGGCTCTGTAGTCTTACTTTGTCACTATACT | 1 | 3.8479e-06 |
| AAAGTTAGCTATCCCGTCTGAGATGAAGAGCTATTTTGGC | 1 | 3.8479e-06 |
| AAAGTTATCCCTGGTGAGGAGCTTGGCTGGAGTTCCGCTT | 1 | 3.8479e-06 |
Read fractions use all reads in this source file as the denominator.