These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016770
NACC2_TG40NTGTGTTYWCB2
- Reads
- 259,882
- Distinct strings in file
- 254,658
- File size
- 3.2 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016770
- Sample:
- SAMEA12312955
- SHA-256
- 4b498375173af5c3ac4002109720de27c803503dfa69574b46cf4648b0e2ec62
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACATAATTTCGCTCGGGTTATAGTCCCAGTTATTCCGCA | 1 | 3.8479e-06 |
| AACATAATTTTGATTCTACACATGCGCTCGCTACACTATA | 1 | 3.8479e-06 |
| AACATACAAGGGGTGTGTCGATACCCATTCTGCGTTACCG | 1 | 3.8479e-06 |
| AACATACATTTGGGACAATCCGATATCGGTGTATGCCTTA | 1 | 3.8479e-06 |
| AACATACATTTTTTGACCGACCCGAGGGTCCTGACCAGAT | 1 | 3.8479e-06 |
| AACATACCATTCTAACGTCGGTATATCTTGTATCCGTCCA | 1 | 3.8479e-06 |
| AACATACGAAAATTATCCCGTTCTGTCATCCTTTCAATGG | 1 | 3.8479e-06 |
| AACATACGATTGCGTTTCCGTCACCTTGCGACTTGTCACG | 1 | 3.8479e-06 |
| AACATACGCAAAGGGATGCACCCATCTCCGTCTATGCAAG | 1 | 3.8479e-06 |
| AACATACGGCACGTCGTCAGTTGTGCAAAAAAGCAAGTCA | 1 | 3.8479e-06 |
| AACATACGTACGTATCCTGAACCGGCTAAGAGAGGTACTG | 1 | 3.8479e-06 |
| AACATACGTGTCAGCGACGCTGCTAATGTTTAGTACTCCG | 1 | 3.8479e-06 |
| AACATACTCTAAGGCATGTTGAGTCGCGCCATCTATAGAT | 1 | 3.8479e-06 |
| AACATACTGCAGATACCACGGAATGTAAGGACGCTCGAAT | 1 | 3.8479e-06 |
| AACATACTTCCGAGGACGGTAATGAGCCCACCCATATGCT | 1 | 3.8479e-06 |
| AACATAGAAAATGTATTAGTGCCGCTCGCTGTACAGATCT | 1 | 3.8479e-06 |
| AACATAGCCAGCCCGAATTAAAGTAATTTGTGTCCCAAAT | 1 | 3.8479e-06 |
| AACATAGCGCATTGTCAGCCACGCGCGTGTATTGTGGGTA | 2 | 7.6958e-06 |
| AACATAGGGAATCTATTCCCCAGAGCATCATAATCTGGTC | 1 | 3.8479e-06 |
| AACATAGGTTCTATACATATCCGCACATCCATCCCTTCGT | 1 | 3.8479e-06 |
| AACATAGTCGTGCATTAATCTCAAATGGTTATTATCTGCA | 1 | 3.8479e-06 |
| AACATAGTTATTGGAGATGAATGTGCCTCCCCTGTTCCTT | 1 | 3.8479e-06 |
| AACATAGTTGGCTTTCCATTTCATTAACCGATCATCATGG | 1 | 3.8479e-06 |
| AACATAGTTTAGATGTGGGATCTGTTTCGAATTTCAACTC | 1 | 3.8479e-06 |
| AACATAGTTTGCCGCCAATCATTGGTAGTATAATGTTCTC | 1 | 3.8479e-06 |
Read fractions use all reads in this source file as the denominator.