These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016770
NACC2_TG40NTGTGTTYWCB2
- Reads
- 259,882
- Distinct strings in file
- 254,658
- File size
- 3.2 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016770
- Sample:
- SAMEA12312955
- SHA-256
- 4b498375173af5c3ac4002109720de27c803503dfa69574b46cf4648b0e2ec62
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACATGCCAGATGCGAAGGGCCTCCATCGACTGCAAGATA | 1 | 3.8479e-06 |
| AACATGCCCCTGATTGCGCCATTGTCGTTACACATCGCAG | 1 | 3.8479e-06 |
| AACATGCCGCGTTTTTAATATTTGGCAACATTATCGCTTT | 1 | 3.8479e-06 |
| AACATGCCGCTGTGTGAAATTGGGTGCTCTATCACGCGTG | 1 | 3.8479e-06 |
| AACATGCCTCTTTCCAACGGTTCGCGTAGGGTTTCTTATA | 1 | 3.8479e-06 |
| AACATGCCTTGCGGTTCTAATTGTGCACGATTTCCAGGGT | 1 | 3.8479e-06 |
| AACATGCGCTGTGTCGCTTCGCCGAACCTAACAAAGATTA | 1 | 3.8479e-06 |
| AACATGCGGACGCCTGTCTGGCAACCTTTCCCGCATCGGC | 1 | 3.8479e-06 |
| AACATGCGTAGGCTCCTGAACACTTGTCGTCTACCTCAAC | 2 | 7.6958e-06 |
| AACATGCGTCCATTCGCAGTTCACCAAGGTTTACACTTGG | 1 | 3.8479e-06 |
| AACATGCGTGGATTAGGTCCTGGTCCCTAATGGTCCGATA | 1 | 3.8479e-06 |
| AACATGCTCACGGCAATATGTTCTGTAGGCTACCCCCGTG | 1 | 3.8479e-06 |
| AACATGCTCAGCCGTATTCATCCGTGGGGCAGTTTAGGGC | 1 | 3.8479e-06 |
| AACATGCTCTATACATTTCGAGGCCTGCTACCTCGATTGT | 1 | 3.8479e-06 |
| AACATGCTCTATACATTTCGAGGCCTGCTACCTNNNNNGT | 1 | 3.8479e-06 |
| AACATGCTCTGACATATGAACAGCATCAATACTACCTCTT | 1 | 3.8479e-06 |
| AACATGCTCTTCTGGTTAACCTTATGCGCGCTTTGGGTCC | 1 | 3.8479e-06 |
| AACATGCTCTTTGATTACCGGTTGAGCGGATGACTTTGGC | 1 | 3.8479e-06 |
| AACATGCTGGCTTACTCTCCGAGTCCCTATTTGATGCTCT | 1 | 3.8479e-06 |
| AACATGCTTGTTTCCTGCCTAAGCACAGCACGGAATAATA | 1 | 3.8479e-06 |
| AACATGGAACCGGCTCTGTCGCACAGCCTCGGTCCGTATC | 1 | 3.8479e-06 |
| AACATGGAATCGCAAGATTCATGATAGGTCTCGCACTTTC | 1 | 3.8479e-06 |
| AACATGGACCGTCCGATCCTTCGAGGTCCCGCCTACACAA | 1 | 3.8479e-06 |
| AACATGGACGCGCATTCCCCGTAGTGTGTCCAAAATGACA | 1 | 3.8479e-06 |
| AACATGGAGCTTTTTTTCCAAACATCAGGACTCACTCTTA | 1 | 3.8479e-06 |
Read fractions use all reads in this source file as the denominator.