P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAACACGTCCCACGCGATGAATGTGTGGAAACAGTA12.30519e-06
AAAAAAACTATGGGTCCAAAAACACGCGTGGTGTGTGTAG12.30519e-06
AAAAAAATAGTGAGAATGCCGTGGGCGTCGTGCCGCATAT24.61038e-06
AAAAAACCAGCCGTGTAATGGCGAGTCTACGTGGGGAAAC12.30519e-06
AAAAAAGCGAGGACTGGCACAGTCACGGAGGTAGATCTGG12.30519e-06
AAAAAAGTGCACGCATCGCAAGGCGGCACGCGTGGGCTGG12.30519e-06
AAAAAATAGCGCTGAAGGGGGACGTGGGTGGCGAGGTGCA12.30519e-06
AAAAAATATCCGTCTAGCGTGGAATCCGTGACGTGGGTGT12.30519e-06
AAAAAATATTAAGTTCACAGCTCGATACGTATGCCACGTA12.30519e-06
AAAAAATCCGTGTAGTAGCCACGCTGGTCACGCGTGGGTG12.30519e-06
AAAAAATCGGTGGGAGCGCGTCGGTACACCGGTGGGCTCA12.30519e-06
AAAAAATGTCCGTGGGTTAGCGGTGCAGGATTGAGCGTGA12.30519e-06
AAAAAATTCGTGGATTGAACGCAGGGCAGGGTAGCGTGGA12.30519e-06
AAAAAATTGTCGCGAACCGTATCGTGGATCCATTGGTGTC12.30519e-06
AAAAACACCTGAGTCCGTGCGCGTGGGAAAACGTAAGGTG12.30519e-06
AAAAACACGAGTGGAAAAGGCCTTGCGGTATCACACAGCT12.30519e-06
AAAAACACGCGTGGTCGAATGCACGCAAAGCGGCTATTCT12.30519e-06
AAAAACACGCGTGTTGAAAATTAGGCTTAGGCGCGTGACT12.30519e-06
AAAAACACGGACTTTTTGCGTGACTTGATAGATCATCACC12.30519e-06
AAAAACACTAGTGGATAACGGTGCTAGTGGCCGTGGGGCA12.30519e-06
AAAAACACTGCGAGTAGTAGGGTCAAAGTGCCCGTGGGAC12.30519e-06
AAAAACATGCAGGTATCACGGTGGGCCCCGTGGGTGGTCG12.30519e-06
AAAAACATTACGATGCTAAGGAGGAAGGGACAGTGGGATA12.30519e-06
AAAAACCCACTATGGCGAGTGGGCCGTTTTGTGTGGTACG12.30519e-06
AAAAACGCGTGAAGTGTACGTGTAGTTCGTGGGGCGAGTC12.30519e-06

Read fractions use all reads in this source file as the denominator.