P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGTGCTGTGAGGACTTCCACGCGGCTTCCACGACCTTA12.30519e-06
AAAGTGGAAGGTGGCGTCTCCTGCGTGGGTAGCATGTATC12.30519e-06
AAAGTGGAAGTCTCGAGTCCATTGCGTGGGCTGCGTGGCT12.30519e-06
AAAGTGGACAGGTGTTCTGAAGGTAATCAGCTGGGGTGGG12.30519e-06
AAAGTGGACAGTTTCATGTGAACAGTTGCGGGCAGGAGTG12.30519e-06
AAAGTGGACCGTTAGAAAGTCACGCGATTCGTGGGGATGT12.30519e-06
AAAGTGGACGCGCCCGCGGCGTCGTGGGTGGCGGTGGGTT12.30519e-06
AAAGTGGAGGGAGGAGTCCACGTCGAGTGTTGGGGACCAT12.30519e-06
AAAGTGGAGGTGTGGGAAGAGGAACGTTCCACGAGTCGTT12.30519e-06
AAAGTGGAGTGCCCACGATCTGGCGCGAGGCAGGCCGGAG12.30519e-06
AAAGTGGATCGTAAGGGTGTTGCGCGTGACGACCGTGGAC12.30519e-06
AAAGTGGATGCGGGTGGGGTCGCGTGGGCAGTAGCGTCCA12.30519e-06
AAAGTGGATGCTAGCGTGGGCTATATCCACTGTGCGATGG12.30519e-06
AAAGTGGATGGCGTGGGTACAGAAGTGGGTAAGGCTGCGC24.61038e-06
AAAGTGGCAAGATTAGACGGCGGTTGCGTGACAGTCTGCG12.30519e-06
AAAGTGGCCACGTGGGTTGTCGTCGGCGTGGGGCCGTTCT12.30519e-06
AAAGTGGCGCGGAAACCGAGGGTGTAGTTCGAGAGAGAGA12.30519e-06
AAAGTGGCGTGGCGTGGAGTTCGTGGGGTGCGATGCGGTA12.30519e-06
AAAGTGGCTAAAAGGCCCACGGCGGTTTGGGAGGCTCACG12.30519e-06
AAAGTGGCTATGTTCTCTCTGGATGTGGAAAGGAGATTTC12.30519e-06
AAAGTGGGAAGAGCCGTGGAAGTGGGGGAACTCGGTGATT12.30519e-06
AAAGTGGGACATACCCGCGTGACTGTGTAAATGCGTGGAG12.30519e-06
AAAGTGGGACCTGAGTGGGGTAGCGTCACATAACGCCTGT12.30519e-06
AAAGTGGGAGACAGACGAGAGATGCGTGGATGCGTGGGGA12.30519e-06
AAAGTGGGAGTGCGTGCGCTGTGCGTGGGTAAGGGTGGTC12.30519e-06

Read fractions use all reads in this source file as the denominator.