P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATAAATAGGCGTTCACGGGCAGAGTGCGTGGGGGCAGG12.30519e-06
AAATAACAAGCTTGGGCTCGGCGGGGGCAATGACGTGGGC12.30519e-06
AAATAACCCACGCGCTCTCGCGAGGAGTGGATCTCGCCGC12.30519e-06
AAATAACGTATCGTGGATCGCTCGAAGGTGGGAGACTCAG12.30519e-06
AAATAAGCCCTCGTCACGAGTGGGGTGCGAAACGGCTGAA12.30519e-06
AAATAAGCGTGGAACGAGCTGGGGTGCGTGGGGCGCCGTG12.30519e-06
AAATAAGCTCATGCGATATTGGCCGTTGGACACGCGTGGT12.30519e-06
AAATAAGCTTAACGTTTAGCCTTTCCAGGACTCGTGCATC12.30519e-06
AAATAAGGGGCCGATCCACGCGAGTCACGTACAGAAAGCG12.30519e-06
AAATAAGTGCGGTCCTGTGAGGGTGGTCGTCGTGGGTGCT12.30519e-06
AAATAATCTTCGCACACGCGTGGGGATCGGTGATGACTTT12.30519e-06
AAATAATTGGGGTTTGGACCACGCGTGGAAGAGAGCATAT12.30519e-06
AAATACAACACGGCCAAGGCGAGGACGCGTGCTGTGGACA12.30519e-06
AAATACACGAGGATCGGTGGAGACTGTGGACTGTTGTGTA12.30519e-06
AAATACACGAGGGTGGAGGCACGTGGACGAGCAAGTGACG12.30519e-06
AAATACACGTAGCGTGGAATGGATTTAGGTGTGAAGACCA12.30519e-06
AAATACCACGCGATAGCAGATCTCCAGTTGCGTGGGAGTG12.30519e-06
AAATACCCACTTGCGCGAAGTGCGTGGGGTTTGTTAAGTG12.30519e-06
AAATACCCCGTTGACGGCGTGGTGTCGTGGACGTGTTTTC12.30519e-06
AAATACCTACCCACGCATCGTTACCGGACCACGGAACAGT12.30519e-06
AAATACCTGAGGCCTGCTGGTTTGCGTGATCTTCTCCACG12.30519e-06
AAATACGAACTTTCGTGGGGAGTCGCGTGTCAAAGTAGGC12.30519e-06
AAATACGATGACGGCTAAGGTAGGGCGGCGGGATACGCGA12.30519e-06
AAATACGGCCACGCGTGGCGTCCTTAGAAAAAAGGTGATG12.30519e-06
AAATACGGTATCATGTGGGTTGTGCGTGGGCGCGGAGCTA12.30519e-06

Read fractions use all reads in this source file as the denominator.