P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATCAGGCCCACGCGTGAAGAGATGAGGTACGCAGTTTC12.30519e-06
AAATCAGTCACGCGTGGCAGGGTGGGGCAGAAGAGTGTCA12.30519e-06
AAATCAGTTTAGGGTTTTCGTTGCGTGGGTGCATAGGCAG12.30519e-06
AAATCATGATTCGTGGGAAGTAGTAGCGTGGGTTGTGGAT12.30519e-06
AAATCATGCGTGGGTGGCCAGAAGGACGACATGATATGTG12.30519e-06
AAATCATGCGTGGTGTCGGGGGATATATACGTGTCGTGGG12.30519e-06
AAATCATGGGTGCGTCACGCGTGGGACAGGGGGAACGGTG12.30519e-06
AAATCATTAGCTCGAGTGGGAGGGTTGGTTGAGGTCGACC12.30519e-06
AAATCCAAAAGACGCGATATTGACGTTTTACGTGGGAGGC12.30519e-06
AAATCCAACGATTGTCGGTAAGTGTGGATGCGCGTGGGAA12.30519e-06
AAATCCAAGTGGAGGTAGTCGATAGGCGTGGATTTGCCTG12.30519e-06
AAATCCACACTGCGTTTGGACACGGGGTAGGCCGCGTGAC12.30519e-06
AAATCCACAGTTCAATATGAGTCCGTGGACGCCAAGACTG12.30519e-06
AAATCCACGAAGGCTTCGTGGTAAGCGGTCACCCTATATT12.30519e-06
AAATCCACGAGTGGACACCTTGGCCACGTCCTAACTCAAT12.30519e-06
AAATCCACGATTGTCCGTCACGGGTGAAGTGGGAAAGCAA12.30519e-06
AAATCCACGCCTAATAGGCCTGGTACGTGCCCGGCGTGGA12.30519e-06
AAATCCACGCGCGTCGTGGATACGGCAGTTGACGGCACTC12.30519e-06
AAATCCACGCGTAGCGGATCGTGGTTTGAGGGGTTGCGTT12.30519e-06
AAATCCACGCGTGGGTGGTTTATGGTGGAAGCGCGGTCGA12.30519e-06
AAATCCACGCGTGTGGTCGACTGAGTTCTCGGGGGACTAG12.30519e-06
AAATCCACGCGTTAGATGGCCGTGTCATTTTCGGATTTTG24.61038e-06
AAATCCACGCTTGCGAGCCACGCGTGTTGCCCACCTGCTT12.30519e-06
AAATCCACGGAAAGAGAGGAATGTCTCCCCGTGTCGGGCA12.30519e-06
AAATCCACGGATGTGTCAGAGTCGGTGGGTCGTTGTGGAT12.30519e-06

Read fractions use all reads in this source file as the denominator.